BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037064
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633847.1| PREDICTED: probable ubiquitin conjugation fa...    67   1e-09
ref|XP_003543890.1| PREDICTED: probable ubiquitin conjugation fa...    67   2e-09
gb|ABG89128.1| UFD2 [synthetic construct]                              65   6e-09
ref|NP_568313.2| putative ubiquitin conjugation factor E4 [Arabi...    65   6e-09
ref|XP_002532897.1| ubiquitin-protein ligase, putative [Ricinus ...    65   7e-09

>ref|XP_003633847.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Vitis
            vinifera] gi|296082973|emb|CBI22274.3| unnamed protein
            product [Vitis vinifera]
          Length = 1037

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 30/41 (73%), Positives = 37/41 (90%)
 Frame = -3

Query: 207  ERHLLSENTDPFNWCYLTPDMLIPDVELKARIEEFVRSHEV 85
            +RHLLS+NTDPFN  +LT DMLIP++ELKARIEEF+RS E+
Sbjct: 970  QRHLLSDNTDPFNRSHLTSDMLIPNIELKARIEEFIRSQEL 1010


>ref|XP_003543890.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Glycine
            max]
          Length = 1038

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 36/60 (60%), Positives = 43/60 (71%)
 Frame = -3

Query: 207  ERHLLSENTDPFNWCYLTPDMLIPDVELKARIEEFVRSHEVN*RSIEVLYISLQIEKVAI 28
            +RHLLS++TDPFN  +LT DMLIPD ELKARIEEFVRS E+        ++SLQ  K  I
Sbjct: 974  QRHLLSDSTDPFNRSHLTADMLIPDDELKARIEEFVRSQEMK------KHLSLQSTKATI 1027


>gb|ABG89128.1| UFD2 [synthetic construct]
          Length = 1037

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/40 (70%), Positives = 36/40 (90%)
 Frame = -3

Query: 207  ERHLLSENTDPFNWCYLTPDMLIPDVELKARIEEFVRSHE 88
            +RHLLS+N DPFN  +LT DMLIPD+ELKA+I+EFV+SH+
Sbjct: 972  QRHLLSDNHDPFNRAHLTSDMLIPDIELKAKIDEFVKSHQ 1011


>ref|NP_568313.2| putative ubiquitin conjugation factor E4 [Arabidopsis thaliana]
            gi|75174048|sp|Q9LF41.1|UBE4_ARATH RecName: Full=Probable
            ubiquitin conjugation factor E4; AltName: Full=Plant
            U-box protein 1; AltName: Full=U-box domain-containing
            protein 1; AltName: Full=Ubiquitin-fusion degradation
            protein 2-like; Short=UB fusion protein 2-like
            gi|9755795|emb|CAC01739.1| ubiquitin-fusion degradation
            protein-like [Arabidopsis thaliana]
            gi|332004773|gb|AED92156.1| putative ubiquitin
            conjugation factor E4 [Arabidopsis thaliana]
          Length = 1038

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/40 (70%), Positives = 36/40 (90%)
 Frame = -3

Query: 207  ERHLLSENTDPFNWCYLTPDMLIPDVELKARIEEFVRSHE 88
            +RHLLS+N DPFN  +LT DMLIPD+ELKA+I+EFV+SH+
Sbjct: 973  QRHLLSDNHDPFNRAHLTSDMLIPDIELKAKIDEFVKSHQ 1012


>ref|XP_002532897.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223527331|gb|EEF29477.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 1031

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 34/60 (56%), Positives = 43/60 (71%)
 Frame = -3

Query: 207  ERHLLSENTDPFNWCYLTPDMLIPDVELKARIEEFVRSHEVN*RSIEVLYISLQIEKVAI 28
            +RHLLS+ TDPFN  +LT DMLIP+VELKARIEEF+R+ E+  R  +    S+Q  K  I
Sbjct: 965  QRHLLSDATDPFNRSHLTADMLIPNVELKARIEEFIRNQELKRRGED---FSMQSSKATI 1021