BLASTX nr result

ID: Coptis23_contig00037045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037045
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528229.1| PREDICTED: uncharacterized protein LOC100805...    74   2e-11
ref|XP_003522290.1| PREDICTED: uncharacterized protein LOC100787...    72   6e-11
ref|XP_002265665.1| PREDICTED: uncharacterized protein LOC100253...    69   3e-10
ref|XP_002514640.1| conserved hypothetical protein [Ricinus comm...    67   1e-09
ref|XP_002317944.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_003528229.1| PREDICTED: uncharacterized protein LOC100805643 [Glycine max]
          Length = 1092

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/75 (49%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
 Frame = -2

Query: 241 SVKITAQKETVSHGVKHRDSPRPLPVTRSVDESVERGINGKYKVPVD---PLNGLTKLQE 71
           SVK TA++E+  +  KHRDSPRP+ +++SVD S   GI+GK  VP+D    +  L KL+E
Sbjct: 160 SVKTTAKEESAINAAKHRDSPRPIQLSKSVDGSYRVGIDGKQSVPIDLKESIRVLAKLRE 219

Query: 70  VPQYFHDTREPPRSS 26
            P Y+ +T+E PRSS
Sbjct: 220 APWYYVETKELPRSS 234


>ref|XP_003522290.1| PREDICTED: uncharacterized protein LOC100787391 [Glycine max]
          Length = 1247

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/75 (46%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
 Frame = -2

Query: 241 SVKITAQKETVSHGVKHRDSPRPLPVTRSVDESVERGINGKYKVPVD---PLNGLTKLQE 71
           S++ TA++E+  +  KHRDSPRP+ +++SVD S   GI+GK  VP+D    +  L KL+E
Sbjct: 308 SLRTTAKEESAINATKHRDSPRPIQLSKSVDGSYRVGIDGKQSVPIDLKESIRVLAKLRE 367

Query: 70  VPQYFHDTREPPRSS 26
            P Y+ +T+E PRSS
Sbjct: 368 APWYYAETKELPRSS 382


>ref|XP_002265665.1| PREDICTED: uncharacterized protein LOC100253543 [Vitis vinifera]
          Length = 1099

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/75 (50%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
 Frame = -2

Query: 241 SVKITAQKETVSHGVKHRDSPRPLPVTRSVDESVERGINGKYKVPVD---PLNGLTKLQE 71
           SVK T ++E V H VK +DSPRP   ++S+D S   G  GK  VPVD    L  L KL+E
Sbjct: 166 SVKTTTREEAVGHAVKPKDSPRPSQPSKSMDGSYGVGTKGKQNVPVDLKESLRVLAKLRE 225

Query: 70  VPQYFHDTREPPRSS 26
            P YF++ RE PRSS
Sbjct: 226 APWYFNEARELPRSS 240


>ref|XP_002514640.1| conserved hypothetical protein [Ricinus communis]
           gi|223546244|gb|EEF47746.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1094

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/77 (45%), Positives = 51/77 (66%), Gaps = 5/77 (6%)
 Frame = -2

Query: 241 SVKITAQKETVSHGVKHRDSPRPLPVTRSVDESVERGINGKY--KVPVD---PLNGLTKL 77
           SVK + ++E + HG+KH+DSPRPL +++S+D S   G  GK     PVD    L  L KL
Sbjct: 166 SVKTSNKEEAIGHGMKHKDSPRPLQLSKSLDGSYGNGKKGKQNTNTPVDLKESLKVLAKL 225

Query: 76  QEVPQYFHDTREPPRSS 26
           +E P Y++++RE P+SS
Sbjct: 226 REAPWYYNESREKPQSS 242


>ref|XP_002317944.1| predicted protein [Populus trichocarpa] gi|222858617|gb|EEE96164.1|
           predicted protein [Populus trichocarpa]
          Length = 1038

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
 Frame = -2

Query: 241 SVKITAQKETVSHGVKHRDSPRPLPVTRSVDESVERGINGKYKV-PVD---PLNGLTKLQ 74
           SVK TA++E +SH VKH+DSPRP   +R  D S   G  GK    PVD    L  L KL+
Sbjct: 157 SVKTTAKEEAMSHIVKHKDSPRPSQASRYADGSYGVGKTGKQNASPVDLKESLGVLAKLR 216

Query: 73  EVPQYFHDTRE-PPRSS 26
           E P Y ++T+E  PR S
Sbjct: 217 EAPLYNNETKEHAPRFS 233


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