BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037032
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containi...   129   3e-28
ref|XP_002303960.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-27
ref|XP_002525566.1| pentatricopeptide repeat-containing protein,...   123   2e-26
ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containi...   119   3e-25
ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containi...   119   3e-25

>ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  129 bits (323), Expect = 3e-28
 Identities = 62/82 (75%), Positives = 71/82 (86%)
 Frame = -3

Query: 250 MILGYAQDGKVNEALRHFSKMQRENVKTDSFTMVSVISALADLSVLRQAKWIHGLTIRSS 71
           MILGYAQ+G++NEA+ +F KMQ +N+K DSFTMVSVI ALA+LSVL QAKWIHGL IR+ 
Sbjct: 449 MILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTC 508

Query: 70  LDKNAFVMTALVDMYAKCGGVH 5
           LDKN FV TALVDMYAKCG VH
Sbjct: 509 LDKNVFVATALVDMYAKCGAVH 530



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 37/81 (45%), Positives = 52/81 (64%)
 Frame = -3

Query: 250 MILGYAQDGKVNEALRHFSKMQRENVKTDSFTMVSVISALADLSVLRQAKWIHGLTIRSS 71
           +I GYAQ+G    AL    +MQ E  + DS T+VS++ A+AD+  LR  + IHG ++R+ 
Sbjct: 247 IISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAG 306

Query: 70  LDKNAFVMTALVDMYAKCGGV 8
            +    V TALVDMY+KCG V
Sbjct: 307 FESFVNVSTALVDMYSKCGSV 327



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/83 (36%), Positives = 46/83 (55%)
 Frame = -3

Query: 250 MILGYAQDGKVNEALRHFSKMQRENVKTDSFTMVSVISALADLSVLRQAKWIHGLTIRSS 71
           MI GY Q+G    A+  F KM  E V+  + T++  + A ADL  + Q +++H L  +  
Sbjct: 348 MIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLE 407

Query: 70  LDKNAFVMTALVDMYAKCGGVHI 2
           L  +  VM +L+ MY+KC  V I
Sbjct: 408 LGSDVSVMNSLISMYSKCKRVDI 430


>ref|XP_002303960.1| predicted protein [Populus trichocarpa] gi|222841392|gb|EEE78939.1|
           predicted protein [Populus trichocarpa]
          Length = 704

 Score =  125 bits (315), Expect = 3e-27
 Identities = 62/82 (75%), Positives = 68/82 (82%)
 Frame = -3

Query: 250 MILGYAQDGKVNEALRHFSKMQRENVKTDSFTMVSVISALADLSVLRQAKWIHGLTIRSS 71
           MILGYAQ+G VNEAL  F +MQ  N+K DSFTMVSVI ALA+LS+ RQAKWIHGL IR  
Sbjct: 304 MILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRF 363

Query: 70  LDKNAFVMTALVDMYAKCGGVH 5
           LDKN FVMTALVDMYAKCG +H
Sbjct: 364 LDKNVFVMTALVDMYAKCGAIH 385



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 37/83 (44%), Positives = 50/83 (60%)
 Frame = -3

Query: 250 MILGYAQDGKVNEALRHFSKMQRENVKTDSFTMVSVISALADLSVLRQAKWIHGLTIRSS 71
           MI GYAQ+G    AL    +M  E  + DS T+VS++ A+AD  +LR    +HG  +R+ 
Sbjct: 102 MISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAG 161

Query: 70  LDKNAFVMTALVDMYAKCGGVHI 2
            +    V TALVDMY+KCG V I
Sbjct: 162 FESLVNVSTALVDMYSKCGSVSI 184



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/83 (38%), Positives = 46/83 (55%)
 Frame = -3

Query: 250 MILGYAQDGKVNEALRHFSKMQRENVKTDSFTMVSVISALADLSVLRQAKWIHGLTIRSS 71
           MI GY Q G    A+  F KM  E V+  + T++  + A ADL  L + K++H L  +  
Sbjct: 203 MIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLK 262

Query: 70  LDKNAFVMTALVDMYAKCGGVHI 2
           LD +  VM +L+ MY+KC  V I
Sbjct: 263 LDSDVSVMNSLISMYSKCKRVDI 285



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/78 (37%), Positives = 45/78 (57%)
 Frame = -3

Query: 250 MILGYAQDGKVNEALRHFSKMQRENVKTDSFTMVSVISALADLSVLRQAKWIHGLTIRSS 71
           M+ GYA+   ++ AL  FS+M+ ++V+   +    ++    D S L++ K IHG  I S 
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60

Query: 70  LDKNAFVMTALVDMYAKC 17
              N F MT +V+MYAKC
Sbjct: 61  FSWNLFAMTGVVNMYAKC 78


>ref|XP_002525566.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535145|gb|EEF36825.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 563

 Score =  123 bits (308), Expect = 2e-26
 Identities = 59/82 (71%), Positives = 68/82 (82%)
 Frame = -3

Query: 250 MILGYAQDGKVNEALRHFSKMQRENVKTDSFTMVSVISALADLSVLRQAKWIHGLTIRSS 71
           MILGYAQ+G++NEAL  F +MQ +N+K DSFTMVSVI ALA+LS+ RQAKWIHGL IR  
Sbjct: 416 MILGYAQNGRLNEALNFFCEMQSQNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRL 475

Query: 70  LDKNAFVMTALVDMYAKCGGVH 5
           LD   FVMTALVDMYAKCG +H
Sbjct: 476 LDDTVFVMTALVDMYAKCGAIH 497



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 36/78 (46%), Positives = 47/78 (60%)
 Frame = -3

Query: 250 MILGYAQDGKVNEALRHFSKMQRENVKTDSFTMVSVISALADLSVLRQAKWIHGLTIRSS 71
           +I GYAQ+G    AL    K+  E  + DS T+VSV+ A+AD+  LR  K IH   IR+ 
Sbjct: 214 IISGYAQNGLTKVALELVPKIFEEGHRPDSVTIVSVLPAVADIRSLRFGKAIHAYVIRAG 273

Query: 70  LDKNAFVMTALVDMYAKC 17
            D    + TALVDMY+KC
Sbjct: 274 FDWLVNISTALVDMYSKC 291



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/78 (38%), Positives = 42/78 (53%)
 Frame = -3

Query: 250 MILGYAQDGKVNEALRHFSKMQRENVKTDSFTMVSVISALADLSVLRQAKWIHGLTIRSS 71
           MI G  ++G   EA   F KM  E ++    T++ V+ A AD   L Q K++H L     
Sbjct: 315 MIAGCVENGDPEEAKVLFKKMMDEGLQPTDVTVMEVLHACADSGDLEQGKFVHKLVEDLK 374

Query: 70  LDKNAFVMTALVDMYAKC 17
           LD N  VM +L+ MY+KC
Sbjct: 375 LDSNVSVMNSLISMYSKC 392



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/78 (34%), Positives = 44/78 (56%)
 Frame = -3

Query: 250 MILGYAQDGKVNEALRHFSKMQRENVKTDSFTMVSVISALADLSVLRQAKWIHGLTIRSS 71
           M+ G+A++  ++ AL  F +M+ +NV+   +    +++   D   LR+ K IHG  I S 
Sbjct: 113 MLKGFAKNSSLDSALLFFCRMKHDNVRPVVYNFTYLLTLCGDNFDLRRGKEIHGQLITSG 172

Query: 70  LDKNAFVMTALVDMYAKC 17
              N F MTA+V +Y KC
Sbjct: 173 FSWNLFAMTAVVSLYCKC 190


>ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  119 bits (298), Expect = 3e-25
 Identities = 59/83 (71%), Positives = 69/83 (83%)
 Frame = -3

Query: 250 MILGYAQDGKVNEALRHFSKMQRENVKTDSFTMVSVISALADLSVLRQAKWIHGLTIRSS 71
           MILGYAQ+G+V+EAL  FS+M+   +K DSFTMVSVI ALA+LSV R AKWIHGL IRS 
Sbjct: 421 MILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSC 480

Query: 70  LDKNAFVMTALVDMYAKCGGVHI 2
           LDKN FV TALVDMY+KCG +H+
Sbjct: 481 LDKNIFVTTALVDMYSKCGAIHM 503



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/81 (43%), Positives = 50/81 (61%)
 Frame = -3

Query: 250 MILGYAQDGKVNEALRHFSKMQRENVKTDSFTMVSVISALADLSVLRQAKWIHGLTIRSS 71
           +I G++Q+G   +AL    +MQ E  + DS T+V+V+ A AD+ +L   K IHG  IR+ 
Sbjct: 219 IIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAG 278

Query: 70  LDKNAFVMTALVDMYAKCGGV 8
             K   + TAL DMY+KCG V
Sbjct: 279 FAKLVNISTALADMYSKCGSV 299



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/83 (33%), Positives = 46/83 (55%)
 Frame = -3

Query: 250 MILGYAQDGKVNEALRHFSKMQRENVKTDSFTMVSVISALADLSVLRQAKWIHGLTIRSS 71
           M+ GY Q+G+  +A+  F KM  E +     T++  + A ADL  L + K++H    + +
Sbjct: 320 MMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLN 379

Query: 70  LDKNAFVMTALVDMYAKCGGVHI 2
           L  +  VM +L+ MY+KC  V I
Sbjct: 380 LGSDISVMNSLISMYSKCKRVDI 402



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 27/78 (34%), Positives = 44/78 (56%)
 Frame = -3

Query: 250 MILGYAQDGKVNEALRHFSKMQRENVKTDSFTMVSVISALADLSVLRQAKWIHGLTIRSS 71
           M+ GYA++  +  AL    +M+ ++VK   +    ++    D + L++ K IHG  I +S
Sbjct: 118 MLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNS 177

Query: 70  LDKNAFVMTALVDMYAKC 17
              N F MT +V+MYAKC
Sbjct: 178 FAANVFAMTGVVNMYAKC 195


>ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  119 bits (298), Expect = 3e-25
 Identities = 59/83 (71%), Positives = 69/83 (83%)
 Frame = -3

Query: 250 MILGYAQDGKVNEALRHFSKMQRENVKTDSFTMVSVISALADLSVLRQAKWIHGLTIRSS 71
           MILGYAQ+G+V+EAL  FS+M+   +K DSFTMVSVI ALA+LSV R AKWIHGL IRS 
Sbjct: 421 MILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSC 480

Query: 70  LDKNAFVMTALVDMYAKCGGVHI 2
           LDKN FV TALVDMY+KCG +H+
Sbjct: 481 LDKNIFVTTALVDMYSKCGAIHM 503



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/81 (43%), Positives = 50/81 (61%)
 Frame = -3

Query: 250 MILGYAQDGKVNEALRHFSKMQRENVKTDSFTMVSVISALADLSVLRQAKWIHGLTIRSS 71
           +I G++Q+G   +AL    +MQ E  + DS T+V+V+ A AD+ +L   K IHG  IR+ 
Sbjct: 219 IIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAG 278

Query: 70  LDKNAFVMTALVDMYAKCGGV 8
             K   + TAL DMY+KCG V
Sbjct: 279 FAKLVNISTALADMYSKCGSV 299



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/83 (33%), Positives = 46/83 (55%)
 Frame = -3

Query: 250 MILGYAQDGKVNEALRHFSKMQRENVKTDSFTMVSVISALADLSVLRQAKWIHGLTIRSS 71
           M+ GY Q+G+  +A+  F KM  E +     T++  + A ADL  L + K++H    + +
Sbjct: 320 MMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLN 379

Query: 70  LDKNAFVMTALVDMYAKCGGVHI 2
           L  +  VM +L+ MY+KC  V I
Sbjct: 380 LGSDISVMNSLISMYSKCKRVDI 402



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 27/78 (34%), Positives = 44/78 (56%)
 Frame = -3

Query: 250 MILGYAQDGKVNEALRHFSKMQRENVKTDSFTMVSVISALADLSVLRQAKWIHGLTIRSS 71
           M+ GYA++  +  AL    +M+ ++VK   +    ++    D + L++ K IHG  I +S
Sbjct: 118 MLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNS 177

Query: 70  LDKNAFVMTALVDMYAKC 17
              N F MT +V+MYAKC
Sbjct: 178 FAANVFAMTGVVNMYAKC 195