BLASTX nr result

ID: Coptis23_contig00037023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037023
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256...    77   1e-12
emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera]    77   1e-12
emb|CAN76026.1| hypothetical protein VITISV_027817 [Vitis vinifera]    77   1e-12
emb|CAN68609.1| hypothetical protein VITISV_012924 [Vitis vinifera]    77   2e-12
emb|CAN77850.1| hypothetical protein VITISV_020834 [Vitis vinifera]    76   3e-12

>ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256388 [Vitis vinifera]
          Length = 2667

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/106 (33%), Positives = 49/106 (46%)
 Frame = -1

Query: 322  ESEWKPKQP*GPYGITLWKSIMKGWENFSKGVTLFPGENSSISFWHDTWLRERPLCEQYV 143
            E  W  K     YG+ +WK+I KGWENF        G+ + + FW D W   + L E + 
Sbjct: 901  EGGWCSKDARNRYGVGVWKAIRKGWENFRSHSRFIIGDGTKVKFWKDLWCGNQSLKETFP 960

Query: 142  AIYGIVVNKNVKVVDYARRSMNGMEWEITLKRRLNDWEAPTFVSLL 5
             ++ + VNK   V +       G  W +   R LNDWE     SLL
Sbjct: 961  ILFNLSVNKEGWVAEAWEEDEGGGSWGLRFNRHLNDWEVGEVESLL 1006


>emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera]
          Length = 4128

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/106 (33%), Positives = 49/106 (46%)
 Frame = -1

Query: 322  ESEWKPKQP*GPYGITLWKSIMKGWENFSKGVTLFPGENSSISFWHDTWLRERPLCEQYV 143
            E  W  K     YG+ +WK+I KGWENF        G+ + + FW D W   + L E + 
Sbjct: 3302 EGGWCSKDARNWYGVGVWKAIRKGWENFRSHSRFIIGDGTKVKFWKDLWCGNQSLKETFP 3361

Query: 142  AIYGIVVNKNVKVVDYARRSMNGMEWEITLKRRLNDWEAPTFVSLL 5
             ++ + VNK   V +       G  W +   R LNDWE     SLL
Sbjct: 3362 ILFNLSVNKEGWVAEAWEEDEGGXSWGLRFNRHLNDWEVGEVESLL 3407



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/78 (34%), Positives = 38/78 (48%)
 Frame = -1

Query: 331  GEGESEWKPKQP*GPYGITLWKSIMKGWENFSKGVTLFPGENSSISFWHDTWLRERPLCE 152
            GE E  W  K+  G YG+ LWK+I K WE          G    + FW D W  ++ L +
Sbjct: 1561 GEEEGGWCSKEVRGAYGVGLWKAIRKDWEIIRSRSRFIVGNGRKVKFWKDLWCEDQALED 1620

Query: 151  QYVAIYGIVVNKNVKVVD 98
             +  ++ + VNKN  V D
Sbjct: 1621 AFPNLFRLAVNKNQWVCD 1638


>emb|CAN76026.1| hypothetical protein VITISV_027817 [Vitis vinifera]
          Length = 1728

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/106 (33%), Positives = 49/106 (46%)
 Frame = -1

Query: 322  ESEWKPKQP*GPYGITLWKSIMKGWENFSKGVTLFPGENSSISFWHDTWLRERPLCEQYV 143
            E  W  K     YG+ +WK+I KGWENF        G+ + + FW D W   + L E + 
Sbjct: 982  EGGWCSKDARNRYGVGVWKAIRKGWENFRSHSRFIIGDGTKVKFWKDLWCGNQSLKETFP 1041

Query: 142  AIYGIVVNKNVKVVDYARRSMNGMEWEITLKRRLNDWEAPTFVSLL 5
             ++ + VNK   V +       G  W +   R LNDWE     SLL
Sbjct: 1042 ILFNLSVNKEGWVAEAWEEDEGGGSWGLRFNRHLNDWEVGEVESLL 1087


>emb|CAN68609.1| hypothetical protein VITISV_012924 [Vitis vinifera]
          Length = 1930

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/106 (33%), Positives = 49/106 (46%)
 Frame = -1

Query: 322  ESEWKPKQP*GPYGITLWKSIMKGWENFSKGVTLFPGENSSISFWHDTWLRERPLCEQYV 143
            E  W  K     YG+ +WK+I KGWENF        G+ + + FW D W   + L E + 
Sbjct: 1784 EGGWCSKDARNXYGVGVWKAIRKGWENFRSHSRFIIGDGTRVKFWKDLWCGNQSLEEAFP 1843

Query: 142  AIYGIVVNKNVKVVDYARRSMNGMEWEITLKRRLNDWEAPTFVSLL 5
             ++ + VNK   V +       G  W +   R LNDWE     SLL
Sbjct: 1844 ILFNLSVNKEGWVAEAWEEDEGGGSWGLRFNRHLNDWEVGEVESLL 1889



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
 Frame = -1

Query: 331 GEGESEWKPKQP*GPYGITLWKSIMKGWENFSKGVTLFPGENSSISFWHDTWLRERPLCE 152
           GE    W  ++    +G+ LWK I   WE  S  +    G    + FW D W  + PLC 
Sbjct: 539 GEERGGWSSREVREAHGLGLWKGIRMNWELVSNRLVFIVGNGRRVRFWRDKWCGDSPLCS 598

Query: 151 QYVAIYGIVVNKNVKVVDYARRSMNG--MEWEITLKRRLNDWE 29
            + +++ +  +K   V D       G    W     R  NDWE
Sbjct: 599 SFPSLFALTDDKEESVADVWDSLAEGGWGGWNPCFVRAFNDWE 641


>emb|CAN77850.1| hypothetical protein VITISV_020834 [Vitis vinifera]
          Length = 1905

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 36/106 (33%), Positives = 49/106 (46%)
 Frame = -1

Query: 322  ESEWKPKQP*GPYGITLWKSIMKGWENFSKGVTLFPGENSSISFWHDTWLRERPLCEQYV 143
            E  W  K     YG+ +WK+I KGWENF        G+ + + FW D W   + L E + 
Sbjct: 1590 EGGWCSKDARNRYGVGVWKAIRKGWENFRSHSRFIIGDGTRVKFWKDLWCGNQSLEEAFP 1649

Query: 142  AIYGIVVNKNVKVVDYARRSMNGMEWEITLKRRLNDWEAPTFVSLL 5
             ++ + VNK   V +       G  W +   R LNDWE     SLL
Sbjct: 1650 ILFNLSVNKEGWVAEAWEEDEGGGSWGLRFNRHLNDWEVGEVESLL 1695


Top