BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037008
         (855 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532555.1| conserved hypothetical protein [Ricinus comm...    67   4e-14
dbj|BAD09445.1| hypothetical protein [Oryza sativa Japonica Grou...    65   7e-12
dbj|BAD08729.1| F-box protein family-like [Oryza sativa Japonica...    67   3e-11
dbj|BAD08724.1| F-box protein family-like [Oryza sativa Japonica...    61   1e-09
gb|EEC83661.1| hypothetical protein OsI_29429 [Oryza sativa Indi...    67   2e-09

>ref|XP_002532555.1| conserved hypothetical protein [Ricinus communis]
           gi|223527710|gb|EEF29816.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 690

 Score = 67.0 bits (162), Expect(2) = 4e-14
 Identities = 56/172 (32%), Positives = 82/172 (47%), Gaps = 4/172 (2%)
 Frame = +2

Query: 62  ISFSAPPTSSEFVVFGHTALS--LSLYR--KGEDTWREYFCDVPWDIMDYPCNPVFCDGE 229
           + FS  PTSS+ +    + L+  + +Y   +G+  W     D   D      +PVF +G 
Sbjct: 479 VGFSTSPTSSDCIAVTISKLNNLIEIYFAFRGDTKWVLEQIDDDTDFTFGGNSPVFYNGV 538

Query: 230 FYCLGKDGMLALFNPEETDEEHQWYVLPVPKVSSSTYSDLPRSFHSFIVEYDAEIVSVFV 409
           FY LG+ G LA+   E  D+   W VL   K   S          +F+VE D  ++SVFV
Sbjct: 539 FYYLGEKGNLAIL--EIIDDMVTWEVLWDLKSPRS------HCHQNFLVECDGNLLSVFV 590

Query: 410 GFLGYPICMFKLDPSKMKWSTSNNLDDKMLFLSHTSSTLLPAKLKGTE*DLF 565
           G     + +F+L  SKM W    NL + M+ +S +SS    AK  G E  +F
Sbjct: 591 GEFEGSVEVFRLSQSKMVWIRVENLGNYMVCVSRSSSFSSLAKAPGMENKIF 642



 Score = 37.4 bits (85), Expect(2) = 4e-14
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = +3

Query: 549 QNRIYFPRFHGNESVFYSLSTKSYRCF 629
           +N+I+FPRF+G   VFYSL T  +  F
Sbjct: 638 ENKIFFPRFYGENIVFYSLDTNKFHSF 664


>dbj|BAD09445.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|125603599|gb|EAZ42924.1| hypothetical protein
           OsJ_27514 [Oryza sativa Japonica Group]
          Length = 760

 Score = 65.5 bits (158), Expect(2) = 7e-12
 Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 4/138 (2%)
 Frame = +2

Query: 146 EDTWREYFCDVPWDIMDYPC---NPVFCDGEFYCLGKDGMLALFNPEETDEEHQWYVLPV 316
           ED W E+  D   D + +P    NPV+  GEFY LG+ G L++FNP      ++W +L  
Sbjct: 576 EDYWSEF--DFENDEVMFPVARNNPVYFRGEFYFLGQRGNLSVFNPGN----NEWRILDK 629

Query: 317 PKVSSSTYSDLPRSFHS-FIVEYDAEIVSVFVGFLGYPICMFKLDPSKMKWSTSNNLDDK 493
           P+   +  +       + ++VE   E+++VF      P  + KLD SKM+W    ++   
Sbjct: 630 PEPIRADLTPYDEGKEACYMVELRGELIAVFHRNANEPPRVLKLDESKMEWVEIEDIGGG 689

Query: 494 MLFLSHTSSTLLPAKLKG 547
            LFL + +S  LP+   G
Sbjct: 690 ALFLDYRASIALPSSEAG 707



 Score = 31.2 bits (69), Expect(2) = 7e-12
 Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
 Frame = +3

Query: 552 NRIYFPRF--HGNESVFYSLSTKSY 620
           NRIYFP+F   G +++FY L  K Y
Sbjct: 710 NRIYFPKFSEDGKKAIFYDLEAKKY 734


>dbj|BAD08729.1| F-box protein family-like [Oryza sativa Japonica Group]
           gi|125603604|gb|EAZ42929.1| hypothetical protein
           OsJ_27518 [Oryza sativa Japonica Group]
          Length = 710

 Score = 67.0 bits (162), Expect(2) = 3e-11
 Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 14/171 (8%)
 Frame = +2

Query: 50  HFLGISFSAP-PTSSEFVVFGHTA------LSLSLYRKGEDTWRE--YFCDVPWDIMDYP 202
           H+ G+SFS+P P       FG  +      L++  +R  E  W E  +  DVP+ +  Y 
Sbjct: 483 HYNGVSFSSPNPMCPNCYFFGINSSLSGKFLNIHTWRHEETEWIEQRFEYDVPFPV-GYN 541

Query: 203 CNPVFCDGEFYCLGKDGMLALFNPEETDEEHQWYVLPVPKVSSSTYSDLPRSFHS----- 367
            NPV   G+FYCLG+ G L  F+P      + W +L  P+       DL ++ H      
Sbjct: 542 -NPVMFCGKFYCLGRKGNLGAFDPTS----NTWEILDKPE-PIHVEMDLLQNDHRGREFC 595

Query: 368 FIVEYDAEIVSVFVGFLGYPICMFKLDPSKMKWSTSNNLDDKMLFLSHTSS 520
           ++V+ + E++SV +        +FKLD +KM W    ++    LFL H +S
Sbjct: 596 YLVDLEGELISVLLHNASEAPRVFKLDLTKMSWVEVEDIGGGALFLDHRTS 646



 Score = 27.3 bits (59), Expect(2) = 3e-11
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +3

Query: 552 NRIYFPRFH-GNESVFYSLSTKSY 620
           NRIYFPR+    + VFY +  K Y
Sbjct: 658 NRIYFPRYSVDRKPVFYDMDNKMY 681


>dbj|BAD08724.1| F-box protein family-like [Oryza sativa Japonica Group]
            gi|42408294|dbj|BAD09449.1| F-box protein family-like
            [Oryza sativa Japonica Group] gi|125561733|gb|EAZ07181.1|
            hypothetical protein OsI_29426 [Oryza sativa Indica
            Group] gi|125603601|gb|EAZ42926.1| hypothetical protein
            OsJ_27515 [Oryza sativa Japonica Group]
          Length = 712

 Score = 61.2 bits (147), Expect(2) = 1e-09
 Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 12/182 (6%)
 Frame = +2

Query: 11   EKITVPDAGVDPCHFLGISFSAP-PTSSEFVVFGHTA------LSLSLYRKGEDTWREYF 169
            E+I  P       ++ G+SFS+  P   +   FG  +      LS   ++ GE  W E  
Sbjct: 472  EEIVEPPMLAFLYNYNGVSFSSSNPMCLDCAFFGINSSDSGKFLSTFTWQHGEPHWIEQE 531

Query: 170  CDVPWDIMDYPCNPVFCDGEFYCLGKDGMLALFNPEETDEEHQWYVLPVPK---VSSSTY 340
             +          NPV  DG+FYCLG+ G L +F+P      + W +L  P+   V    +
Sbjct: 532  FEYNVSFPVGYNNPVMFDGKFYCLGRKGNLGVFDP----TSNTWRILDKPEPIHVEMDLF 587

Query: 341  SD--LPRSFHSFIVEYDAEIVSVFVGFLGYPICMFKLDPSKMKWSTSNNLDDKMLFLSHT 514
             +  + R F  ++V+ D E++SVF+        +FKL+ +++ W    ++    LFL + 
Sbjct: 588  EEDHIGREF-CYLVDMDGELISVFLRNANELPRVFKLNRTEISWVEVEDIGGGALFLDYR 646

Query: 515  SS 520
            SS
Sbjct: 647  SS 648



 Score = 28.1 bits (61), Expect(2) = 1e-09
 Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
 Frame = +3

Query: 552 NRIYFPRF-HGNESVFYSLSTKSY 620
           NRIYFPR+    + VFY ++ K+Y
Sbjct: 660 NRIYFPRYSKDGKPVFYDMNKKTY 683


>gb|EEC83661.1| hypothetical protein OsI_29429 [Oryza sativa Indica Group]
          Length = 476

 Score = 66.6 bits (161), Expect(2) = 2e-09
 Identities = 53/171 (30%), Positives = 82/171 (47%), Gaps = 14/171 (8%)
 Frame = +2

Query: 50  HFLGISFSAP-PTSSEFVVFGHTA------LSLSLYRKGEDTWRE--YFCDVPWDIMDYP 202
           H+ G+SFS+P P       FG  +      L++  +R  E  W E  +  DVP+ +  Y 
Sbjct: 275 HYNGVSFSSPNPMCPNCYFFGINSSLSGKFLNIHTWRHEETEWIEQRFEYDVPFPV-GYN 333

Query: 203 CNPVFCDGEFYCLGKDGMLALFNPEETDEEHQWYVLPVPKVSSSTYSDLPRSFHS----- 367
            NPV   G+FYCLG+ G L  F+P      + W +L  P+       DL  + H      
Sbjct: 334 -NPVMFCGKFYCLGRKGNLGAFDPTS----NTWEILDKPE-PIHVEMDLLENDHRGREFC 387

Query: 368 FIVEYDAEIVSVFVGFLGYPICMFKLDPSKMKWSTSNNLDDKMLFLSHTSS 520
           ++V+ + E++SV +        +FKLD +KM W    ++    LFL H +S
Sbjct: 388 YLVDLEGELISVLLHNASEAPRVFKLDLTKMSWVEVEDIGGGALFLDHRTS 438



 Score = 21.9 bits (45), Expect(2) = 2e-09
 Identities = 10/22 (45%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = +3

Query: 552 NRIYFPRFH-GNESVFYSLSTK 614
           NRIYFPR+    + V Y +  K
Sbjct: 450 NRIYFPRYSVDRKPVSYDMDNK 471