BLASTX nr result
ID: Coptis23_contig00037006
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00037006 (330 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002303430.1| predicted protein [Populus trichocarpa] gi|1... 70 2e-10 ref|XP_003628750.1| Phosphatidylinositol-glycan biosynthesis cla... 64 1e-08 ref|XP_003628749.1| Phosphatidylinositol-glycan biosynthesis cla... 64 1e-08 ref|XP_003527241.1| PREDICTED: phosphatidylinositol-glycan biosy... 64 2e-08 ref|XP_002278687.1| PREDICTED: uncharacterized protein LOC100252... 59 4e-07 >ref|XP_002303430.1| predicted protein [Populus trichocarpa] gi|118488795|gb|ABK96208.1| unknown [Populus trichocarpa] gi|222840862|gb|EEE78409.1| predicted protein [Populus trichocarpa] Length = 315 Score = 69.7 bits (169), Expect = 2e-10 Identities = 33/84 (39%), Positives = 46/84 (54%) Frame = +3 Query: 63 PLDSNGYSRVEMCMPDVLMRCSFKEKSEYNDCVWTTPPERTDSNTSALVWRIPSGNEAHS 242 PLD +GYS VE P++ +RCS +E ++ C+ +RT S T +VWRIPSG AH+ Sbjct: 219 PLDDSGYSEVEFGEPEIFLRCSMEENGDHESCLLMPTNDRTGSRTDNVVWRIPSGIRAHA 278 Query: 243 GXXXXXXXXXXXXXXXXIVLTAIY 314 G IVLT+I+ Sbjct: 279 GIVSAVTFLAASISTLLIVLTSIF 302 >ref|XP_003628750.1| Phosphatidylinositol-glycan biosynthesis class X protein [Medicago truncatula] gi|355522772|gb|AET03226.1| Phosphatidylinositol-glycan biosynthesis class X protein [Medicago truncatula] Length = 256 Score = 63.9 bits (154), Expect = 1e-08 Identities = 30/60 (50%), Positives = 41/60 (68%) Frame = +3 Query: 63 PLDSNGYSRVEMCMPDVLMRCSFKEKSEYNDCVWTTPPERTDSNTSALVWRIPSGNEAHS 242 PL+ +GYS VE PD+L+RCS KEK E N+C++ + + + LVWRIPSG +AHS Sbjct: 160 PLNESGYSIVEFGAPDMLLRCSRKEKVENNNCLFRLKIDDANLYDAGLVWRIPSGRKAHS 219 >ref|XP_003628749.1| Phosphatidylinositol-glycan biosynthesis class X protein [Medicago truncatula] gi|355522771|gb|AET03225.1| Phosphatidylinositol-glycan biosynthesis class X protein [Medicago truncatula] Length = 368 Score = 63.9 bits (154), Expect = 1e-08 Identities = 30/60 (50%), Positives = 41/60 (68%) Frame = +3 Query: 63 PLDSNGYSRVEMCMPDVLMRCSFKEKSEYNDCVWTTPPERTDSNTSALVWRIPSGNEAHS 242 PL+ +GYS VE PD+L+RCS KEK E N+C++ + + + LVWRIPSG +AHS Sbjct: 272 PLNESGYSIVEFGAPDMLLRCSRKEKVENNNCLFRLKIDDANLYDAGLVWRIPSGRKAHS 331 >ref|XP_003527241.1| PREDICTED: phosphatidylinositol-glycan biosynthesis class X protein-like [Glycine max] Length = 292 Score = 63.5 bits (153), Expect = 2e-08 Identities = 30/86 (34%), Positives = 48/86 (55%) Frame = +3 Query: 63 PLDSNGYSRVEMCMPDVLMRCSFKEKSEYNDCVWTTPPERTDSNTSALVWRIPSGNEAHS 242 PL+ +GYS +E PD+++RCS KEK E ++C + + + + +VWRIPSG +AH+ Sbjct: 204 PLNGSGYSAIEFGAPDMVVRCSTKEKMENHNCFFKLEKDDANLYGAHIVWRIPSGIKAHA 263 Query: 243 GXXXXXXXXXXXXXXXXIVLTAIYSP 320 G IV+ ++Y P Sbjct: 264 GLVSAVTFIAALLSTIAIVVASLYQP 289 >ref|XP_002278687.1| PREDICTED: uncharacterized protein LOC100252266 [Vitis vinifera] gi|297742059|emb|CBI33846.3| unnamed protein product [Vitis vinifera] Length = 329 Score = 58.9 bits (141), Expect = 4e-07 Identities = 29/89 (32%), Positives = 43/89 (48%) Frame = +3 Query: 63 PLDSNGYSRVEMCMPDVLMRCSFKEKSEYNDCVWTTPPERTDSNTSALVWRIPSGNEAHS 242 PL+ +GYS +E+ PD+ MRCS + KS C+ +VWR+PSG +AH+ Sbjct: 233 PLEESGYSNIELGAPDLFMRCSIEAKSHNQSCLLMLKDNGVALGNGPVVWRVPSGIKAHA 292 Query: 243 GXXXXXXXXXXXXXXXXIVLTAIYSPNWK 329 IVLT++Y + K Sbjct: 293 RAVSIVTFISAILSTLSIVLTSVYYSSTK 321