BLASTX nr result

ID: Coptis23_contig00037006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00037006
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303430.1| predicted protein [Populus trichocarpa] gi|1...    70   2e-10
ref|XP_003628750.1| Phosphatidylinositol-glycan biosynthesis cla...    64   1e-08
ref|XP_003628749.1| Phosphatidylinositol-glycan biosynthesis cla...    64   1e-08
ref|XP_003527241.1| PREDICTED: phosphatidylinositol-glycan biosy...    64   2e-08
ref|XP_002278687.1| PREDICTED: uncharacterized protein LOC100252...    59   4e-07

>ref|XP_002303430.1| predicted protein [Populus trichocarpa] gi|118488795|gb|ABK96208.1|
           unknown [Populus trichocarpa]
           gi|222840862|gb|EEE78409.1| predicted protein [Populus
           trichocarpa]
          Length = 315

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/84 (39%), Positives = 46/84 (54%)
 Frame = +3

Query: 63  PLDSNGYSRVEMCMPDVLMRCSFKEKSEYNDCVWTTPPERTDSNTSALVWRIPSGNEAHS 242
           PLD +GYS VE   P++ +RCS +E  ++  C+     +RT S T  +VWRIPSG  AH+
Sbjct: 219 PLDDSGYSEVEFGEPEIFLRCSMEENGDHESCLLMPTNDRTGSRTDNVVWRIPSGIRAHA 278

Query: 243 GXXXXXXXXXXXXXXXXIVLTAIY 314
           G                IVLT+I+
Sbjct: 279 GIVSAVTFLAASISTLLIVLTSIF 302


>ref|XP_003628750.1| Phosphatidylinositol-glycan biosynthesis class X protein [Medicago
           truncatula] gi|355522772|gb|AET03226.1|
           Phosphatidylinositol-glycan biosynthesis class X protein
           [Medicago truncatula]
          Length = 256

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/60 (50%), Positives = 41/60 (68%)
 Frame = +3

Query: 63  PLDSNGYSRVEMCMPDVLMRCSFKEKSEYNDCVWTTPPERTDSNTSALVWRIPSGNEAHS 242
           PL+ +GYS VE   PD+L+RCS KEK E N+C++    +  +   + LVWRIPSG +AHS
Sbjct: 160 PLNESGYSIVEFGAPDMLLRCSRKEKVENNNCLFRLKIDDANLYDAGLVWRIPSGRKAHS 219


>ref|XP_003628749.1| Phosphatidylinositol-glycan biosynthesis class X protein [Medicago
           truncatula] gi|355522771|gb|AET03225.1|
           Phosphatidylinositol-glycan biosynthesis class X protein
           [Medicago truncatula]
          Length = 368

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/60 (50%), Positives = 41/60 (68%)
 Frame = +3

Query: 63  PLDSNGYSRVEMCMPDVLMRCSFKEKSEYNDCVWTTPPERTDSNTSALVWRIPSGNEAHS 242
           PL+ +GYS VE   PD+L+RCS KEK E N+C++    +  +   + LVWRIPSG +AHS
Sbjct: 272 PLNESGYSIVEFGAPDMLLRCSRKEKVENNNCLFRLKIDDANLYDAGLVWRIPSGRKAHS 331


>ref|XP_003527241.1| PREDICTED: phosphatidylinositol-glycan biosynthesis class X
           protein-like [Glycine max]
          Length = 292

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/86 (34%), Positives = 48/86 (55%)
 Frame = +3

Query: 63  PLDSNGYSRVEMCMPDVLMRCSFKEKSEYNDCVWTTPPERTDSNTSALVWRIPSGNEAHS 242
           PL+ +GYS +E   PD+++RCS KEK E ++C +    +  +   + +VWRIPSG +AH+
Sbjct: 204 PLNGSGYSAIEFGAPDMVVRCSTKEKMENHNCFFKLEKDDANLYGAHIVWRIPSGIKAHA 263

Query: 243 GXXXXXXXXXXXXXXXXIVLTAIYSP 320
           G                IV+ ++Y P
Sbjct: 264 GLVSAVTFIAALLSTIAIVVASLYQP 289


>ref|XP_002278687.1| PREDICTED: uncharacterized protein LOC100252266 [Vitis vinifera]
           gi|297742059|emb|CBI33846.3| unnamed protein product
           [Vitis vinifera]
          Length = 329

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/89 (32%), Positives = 43/89 (48%)
 Frame = +3

Query: 63  PLDSNGYSRVEMCMPDVLMRCSFKEKSEYNDCVWTTPPERTDSNTSALVWRIPSGNEAHS 242
           PL+ +GYS +E+  PD+ MRCS + KS    C+              +VWR+PSG +AH+
Sbjct: 233 PLEESGYSNIELGAPDLFMRCSIEAKSHNQSCLLMLKDNGVALGNGPVVWRVPSGIKAHA 292

Query: 243 GXXXXXXXXXXXXXXXXIVLTAIYSPNWK 329
                            IVLT++Y  + K
Sbjct: 293 RAVSIVTFISAILSTLSIVLTSVYYSSTK 321


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