BLASTX nr result

ID: Coptis23_contig00036887 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036887
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266452.2| PREDICTED: disease resistance response prote...    65   7e-09
ref|XP_002297761.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_002513105.1| Disease resistance response protein, putativ...    58   9e-07
ref|XP_002312128.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002266452.2| PREDICTED: disease resistance response protein 206-like [Vitis
           vinifera] gi|147821135|emb|CAN62170.1| hypothetical
           protein VITISV_027159 [Vitis vinifera]
           gi|296081293|emb|CBI17737.3| unnamed protein product
           [Vitis vinifera]
          Length = 182

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 39/80 (48%), Positives = 48/80 (60%)
 Frame = +2

Query: 62  MASAPTYFFNFILLSTLSIITNGGNSGWYSETKLTDKMEEKVTNFHFYFHDTVSGNNPSA 241
           MAS  TY   F L ST SI      S  ++E   T ++E KV++ HFYFHD +SG NP+A
Sbjct: 1   MASFLTYTTLFSLFSTFSITIPAAFSQQFAEEIATMRLE-KVSHLHFYFHDILSGKNPTA 59

Query: 242 IVIAGPKDTASFGTTRIVDD 301
             IAGPK    FG T +VDD
Sbjct: 60  TQIAGPK-KGHFGVTMMVDD 78


>ref|XP_002297761.1| predicted protein [Populus trichocarpa] gi|222845019|gb|EEE82566.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/76 (48%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
 Frame = +2

Query: 80  YFFNFILLSTLSIITNGGNSGWYSETK--LTDKMEEKVTNFHFYFHDTVSGNNPSAIVIA 253
           +  +FIL S L  IT G    +Y E    +  K  EK T+ HFYFHD VSG NP+AI IA
Sbjct: 10  FTLHFILFSYLCTITCGA---FYEEVTEAIAIKRIEKTTHLHFYFHDIVSGKNPTAIRIA 66

Query: 254 GPKDTASFGTTRIVDD 301
           GP D  +FG T + DD
Sbjct: 67  GP-DNYAFGNTMMADD 81


>ref|XP_002513105.1| Disease resistance response protein, putative [Ricinus communis]
           gi|223548116|gb|EEF49608.1| Disease resistance response
           protein, putative [Ricinus communis]
          Length = 186

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
 Frame = +2

Query: 92  FILLSTLSIITNGGNSGWYSETK--LTDKMEEKVTNFHFYFHDTVSGNNPSAIVIAGPKD 265
           FIL  ++  +++G    +Y E    +  K EEK T+ HFYFHD V+G N +AI IAGP D
Sbjct: 14  FILFPSIFTLSHGV---FYEELAEGIAIKREEKTTHLHFYFHDIVAGKNATAIRIAGPPD 70

Query: 266 TA--SFGTTRIVDD 301
           ++  +FG T ++DD
Sbjct: 71  SSLTNFGNTMMIDD 84


>ref|XP_002312128.1| predicted protein [Populus trichocarpa] gi|222851948|gb|EEE89495.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
 Frame = +2

Query: 110 LSIITNGGNSGWYSETKLTDKMEEKVTNFHFYFHDTVSGNNPSAIVIAGPKDT-----AS 274
           L +IT   +  +YS++   + + E+ TN HF+FHDT+SG NPSA+++A P  T     A 
Sbjct: 15  LFMITTHAHGQYYSQSVPYESLPERTTNLHFFFHDTLSGKNPSAVLVARPNITTGQSLAP 74

Query: 275 FGTTRIVDD 301
           FG+  +  D
Sbjct: 75  FGSIFVFHD 83


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