BLASTX nr result

ID: Coptis23_contig00036841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036841
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37650.3| unnamed protein product [Vitis vinifera]              101   7e-20
ref|XP_002273200.1| PREDICTED: protein RKD5-like [Vitis vinifera]     101   7e-20
ref|XP_002521715.1| transcription factor, putative [Ricinus comm...   101   7e-20
ref|NP_195284.1| RWP-RK domain-containing protein [Arabidopsis t...   100   2e-19
ref|XP_002869079.1| RWP-RK domain-containing protein [Arabidopsi...    98   6e-19

>emb|CBI37650.3| unnamed protein product [Vitis vinifera]
          Length = 160

 Score =  101 bits (251), Expect = 7e-20
 Identities = 50/101 (49%), Positives = 70/101 (69%)
 Frame = +2

Query: 2   NLKVGQTVLKRKCRDFGIPKWPYRKIKSLDNLIHNIKAEVGRQQAKMNQETAEAVLETQX 181
           NLK+G TVLKRKCR+FGIP+WP+RKIKSLD LI +++ E  RQQ + N+  A AVL+ Q 
Sbjct: 33  NLKIGLTVLKRKCREFGIPRWPHRKIKSLDGLIRDLQEEAERQQLE-NKAAAMAVLKRQR 91

Query: 182 XXXXXXXXXXXRPAIQLKSETKKFRERLFKRKHLAQRSQER 304
                      RP ++++ ETK+FR+ +FKR+H A+  + R
Sbjct: 92  MLETEKECIEQRPFMEIEDETKRFRQDVFKRRHRARALKNR 132


>ref|XP_002273200.1| PREDICTED: protein RKD5-like [Vitis vinifera]
          Length = 302

 Score =  101 bits (251), Expect = 7e-20
 Identities = 50/101 (49%), Positives = 70/101 (69%)
 Frame = +2

Query: 2   NLKVGQTVLKRKCRDFGIPKWPYRKIKSLDNLIHNIKAEVGRQQAKMNQETAEAVLETQX 181
           NLK+G TVLKRKCR+FGIP+WP+RKIKSLD LI +++ E  RQQ + N+  A AVL+ Q 
Sbjct: 202 NLKIGLTVLKRKCREFGIPRWPHRKIKSLDGLIRDLQEEAERQQLE-NKAAAMAVLKRQR 260

Query: 182 XXXXXXXXXXXRPAIQLKSETKKFRERLFKRKHLAQRSQER 304
                      RP ++++ ETK+FR+ +FKR+H A+  + R
Sbjct: 261 MLETEKECIEQRPFMEIEDETKRFRQDVFKRRHRARALKNR 301


>ref|XP_002521715.1| transcription factor, putative [Ricinus communis]
           gi|223539106|gb|EEF40702.1| transcription factor,
           putative [Ricinus communis]
          Length = 223

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/96 (51%), Positives = 70/96 (72%)
 Frame = +2

Query: 2   NLKVGQTVLKRKCRDFGIPKWPYRKIKSLDNLIHNIKAEVGRQQAKMNQETAEAVLETQX 181
           NLKVG TVLKRKCR+FGIP+WP+RKIKSLD+LI N++ E  RQ+ + N++ A AV + Q 
Sbjct: 122 NLKVGLTVLKRKCREFGIPRWPHRKIKSLDSLIRNLQEEAERQKQE-NEDAAMAVAKRQR 180

Query: 182 XXXXXXXXXXXRPAIQLKSETKKFRERLFKRKHLAQ 289
                      +P ++++SETK+FR+ +FKR+H A+
Sbjct: 181 MLEREKETIERKPFMEIQSETKRFRQDVFKRRHRAR 216


>ref|NP_195284.1| RWP-RK domain-containing protein [Arabidopsis thaliana]
           gi|75100411|sp|O81791.1|RKD5_ARATH RecName: Full=Protein
           RKD5; Short=AtRKD5; AltName: Full=RWP-RK
           domain-containing protein 5 gi|3367577|emb|CAA20029.1|
           putative protein [Arabidopsis thaliana]
           gi|7270510|emb|CAB80275.1| putative protein [Arabidopsis
           thaliana] gi|332661137|gb|AEE86537.1| RWP-RK
           domain-containing protein [Arabidopsis thaliana]
          Length = 370

 Score =  100 bits (248), Expect = 2e-19
 Identities = 50/100 (50%), Positives = 69/100 (69%)
 Frame = +2

Query: 2   NLKVGQTVLKRKCRDFGIPKWPYRKIKSLDNLIHNIKAEVGRQQAKMNQETAEAVLETQX 181
           NLKVG TVLK+KCR+FGIP+WP+RKIKSLD LIH+++ E  +QQ K N+  A AV + Q 
Sbjct: 261 NLKVGLTVLKKKCREFGIPRWPHRKIKSLDCLIHDLQREAEKQQEK-NEAAAMAVAKKQE 319

Query: 182 XXXXXXXXXXXRPAIQLKSETKKFRERLFKRKHLAQRSQE 301
                      RP +++  ETKKFR+  FK++H A R+++
Sbjct: 320 KLETEKRNIVKRPFMEIGIETKKFRQENFKKRHRASRAKK 359


>ref|XP_002869079.1| RWP-RK domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297314915|gb|EFH45338.1| RWP-RK domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 329

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 48/100 (48%), Positives = 70/100 (70%)
 Frame = +2

Query: 2   NLKVGQTVLKRKCRDFGIPKWPYRKIKSLDNLIHNIKAEVGRQQAKMNQETAEAVLETQX 181
           NL VG TVLK+KCR+FGIP+WP+RKIKSLD+LI +++ E  +QQ K N+  A AV + Q 
Sbjct: 220 NLNVGLTVLKKKCREFGIPRWPHRKIKSLDSLIQDLQREAEKQQEK-NEAAAMAVAKKQE 278

Query: 182 XXXXXXXXXXXRPAIQLKSETKKFRERLFKRKHLAQRSQE 301
                      RP +++++ETKKFR+  FK++H A R+++
Sbjct: 279 KLETEKRNIVMRPFMEIQTETKKFRQDNFKKRHRASRAKK 318


Top