BLASTX nr result

ID: Coptis23_contig00036815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036815
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60856.1| hypothetical protein VITISV_026074 [Vitis vinifera]    71   1e-10
ref|XP_002275476.2| PREDICTED: ubiquitin carboxyl-terminal hydro...    70   2e-10
emb|CBI21539.3| unnamed protein product [Vitis vinifera]               70   2e-10
ref|XP_002532774.1| ubiquitin-specific protease, putative [Ricin...    66   3e-09
ref|XP_004148458.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    64   1e-08

>emb|CAN60856.1| hypothetical protein VITISV_026074 [Vitis vinifera]
          Length = 559

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/80 (47%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
 Frame = -2

Query: 352 QILCIQPQRASVNKFGESVKLQGHISFPMILDLFPFTKDAVGLGIENLNENLGKIQVK-Q 176
           +ILCI  QRAS+  FGE  K+QGHISFP+IL+L PF K  V  GI+N  +N  + + K Q
Sbjct: 306 KILCIHLQRASMTIFGELTKVQGHISFPLILNLLPFMKSEV--GIKNWEDNFLRXRAKQQ 363

Query: 175 HLSPIPRHNYFDMQLEWQML 116
           +  P+P   +F +Q + +ML
Sbjct: 364 NQQPVPDLKHFXLQFDTRML 383


>ref|XP_002275476.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like [Vitis
           vinifera]
          Length = 641

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 38/80 (47%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
 Frame = -2

Query: 352 QILCIQPQRASVNKFGESVKLQGHISFPMILDLFPFTKDAVGLGIENLNENLGKIQVK-Q 176
           +ILCI  QRAS+  FGE  K+QGHISFP+IL+L PF K  V  GI+N  +N  + + K Q
Sbjct: 361 KILCIHLQRASMTIFGELTKVQGHISFPLILNLLPFMKSEV--GIKNWEDNFLRQRAKQQ 418

Query: 175 HLSPIPRHNYFDMQLEWQML 116
           +  P+P   +F +Q + +ML
Sbjct: 419 NQQPVPDLKHFKLQFDTRML 438


>emb|CBI21539.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 38/80 (47%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
 Frame = -2

Query: 352 QILCIQPQRASVNKFGESVKLQGHISFPMILDLFPFTKDAVGLGIENLNENLGKIQVK-Q 176
           +ILCI  QRAS+  FGE  K+QGHISFP+IL+L PF K  V  GI+N  +N  + + K Q
Sbjct: 306 KILCIHLQRASMTIFGELTKVQGHISFPLILNLLPFMKSEV--GIKNWEDNFLRQRAKQQ 363

Query: 175 HLSPIPRHNYFDMQLEWQML 116
           +  P+P   +F +Q + +ML
Sbjct: 364 NQQPVPDLKHFKLQFDTRML 383


>ref|XP_002532774.1| ubiquitin-specific protease, putative [Ricinus communis]
           gi|223527484|gb|EEF29613.1| ubiquitin-specific protease,
           putative [Ricinus communis]
          Length = 503

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 43/109 (39%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
 Frame = -2

Query: 352 QILCIQPQRASVNKFGESVKLQGHISFPMILDLFPFTKDAVGLGIENLNENLGKIQVKQH 173
           +ILCI  QRAS+N+FGE VKLQGH+SFP+ILD+ PFT              L K+Q ++ 
Sbjct: 360 KILCIHLQRASINQFGELVKLQGHVSFPLILDILPFT--------------LEKVQCQKR 405

Query: 172 LSPIPRHNYFDMQLEWQMLKHTDGPTEDY----VISDFG--GSLHRTLH 44
               P  NY ++Q + +ML         Y    V+  FG  G  H T++
Sbjct: 406 ---SPHLNYLNVQPDTRMLNFVPSQPLVYRLVSVVEHFGKTGGGHYTVY 451


>ref|XP_004148458.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like [Cucumis
           sativus]
          Length = 559

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/86 (43%), Positives = 53/86 (61%)
 Frame = -2

Query: 352 QILCIQPQRASVNKFGESVKLQGHISFPMILDLFPFTKDAVGLGIENLNENLGKIQVKQH 173
           +ILCI  +R S N FG++ KLQGHISFP+ILD+ PF     G+ I++L   LG  Q   +
Sbjct: 340 KILCIHLKRVSTNMFGDAFKLQGHISFPLILDMSPFM--LTGVEIKDLEGQLGG-QHSSN 396

Query: 172 LSPIPRHNYFDMQLEWQMLKHTDGPT 95
             P    ++F  Q + +MLK+ +G T
Sbjct: 397 KKPSHGLDFFRTQFDARMLKYINGLT 422


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