BLASTX nr result

ID: Coptis23_contig00036786 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036786
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                132   4e-29
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]   116   2e-24
gb|ACN32036.1| unknown [Zea mays]                                     112   4e-23
gb|ACL54615.1| unknown [Zea mays]                                     110   9e-23
ref|XP_002330417.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-22

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  132 bits (331), Expect = 4e-29
 Identities = 65/144 (45%), Positives = 97/144 (67%)
 Frame = -2

Query: 434 IDGTEPCPPKYVLDASGNQTTQISPFFTSWMKKDQMLMIWINSTLSEEILPYVIGLPTSR 255
           ++G + CPP +V D SG      S  F +W ++DQ+LMIWINSTLS+++LP  IG+  SR
Sbjct: 303 VNGEDLCPPPFVRDPSGTCVPNAS--FETWCERDQILMIWINSTLSKDLLPLTIGMEDSR 360

Query: 254 ALWNALETRFATLSRSHVLQLKSQLQDVKKEGSTMAEYLHKMKCITDALAASAAIVDEGD 75
           +LW +LE RF+  SR+HV  L+S++Q + K  S+M ++L+ +K I++ LAA+   + E D
Sbjct: 361 SLWQSLERRFSGASRTHVHSLRSKIQTIHKGDSSMTDFLNSIKEISNKLAAAGEPLSESD 420

Query: 74  LVFHTLKGLPKEYAAFCTSIRVRS 3
           LV + L GLP EY +F  SI  R+
Sbjct: 421 LVAYILSGLPDEYESFVDSIETRN 444


>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score =  116 bits (290), Expect = 2e-24
 Identities = 62/145 (42%), Positives = 88/145 (60%)
 Frame = -2

Query: 437 FIDGTEPCPPKYVLDASGNQTTQISPFFTSWMKKDQMLMIWINSTLSEEILPYVIGLPTS 258
           FIDGTE CPPK+   ASG+    ++P +  W KKD  L+ WI ++LSE+++  + GL TS
Sbjct: 50  FIDGTEACPPKHT--ASGS----LNPAYVVWQKKDVCLLGWILASLSEKLVSTIYGLETS 103

Query: 257 RALWNALETRFATLSRSHVLQLKSQLQDVKKEGSTMAEYLHKMKCITDALAASAAIVDEG 78
           + +W AL+TRF++ SRS +  LK QLQ + +   + +EYL   K + D LAA+   VD+ 
Sbjct: 104 KQVWTALQTRFSSQSRSRISHLKRQLQTLTQGTKSCSEYLESAKTLADQLAAAGKPVDDQ 163

Query: 77  DLVFHTLKGLPKEYAAFCTSIRVRS 3
           DL+   L GL   Y  F TS    S
Sbjct: 164 DLISFLLGGLQSSYTPFVTSFNFAS 188


>gb|ACN32036.1| unknown [Zea mays]
          Length = 376

 Score =  112 bits (279), Expect = 4e-23
 Identities = 57/147 (38%), Positives = 91/147 (61%), Gaps = 4/147 (2%)
 Frame = -2

Query: 434 IDGTEPCPPKYVL----DASGNQTTQISPFFTSWMKKDQMLMIWINSTLSEEILPYVIGL 267
           IDG+ P P + V     + SG +T  I+P FTSW  +DQ+++  INS+LSEE+L  V+  
Sbjct: 55  IDGSLPAPRQTVAVDPAEGSGGRTIAINPEFTSWYHQDQLVLSVINSSLSEEVLATVVDA 114

Query: 266 PTSRALWNALETRFATLSRSHVLQLKSQLQDVKKEGSTMAEYLHKMKCITDALAASAAIV 87
            T+R  W+ LE  +A+ SR+ ++Q++ QL  ++K   T AEY  K+K + D LAA    +
Sbjct: 115 TTARGAWSTLERMYASSSRARIMQIRMQLATIQKGDLTAAEYFRKVKRLADTLAAVGKRL 174

Query: 86  DEGDLVFHTLKGLPKEYAAFCTSIRVR 6
           ++ + + + L+GLP +Y +  TSI  R
Sbjct: 175 EDEEFISYLLRGLPADYDSLVTSITTR 201


>gb|ACL54615.1| unknown [Zea mays]
          Length = 376

 Score =  110 bits (276), Expect = 9e-23
 Identities = 57/147 (38%), Positives = 90/147 (61%), Gaps = 4/147 (2%)
 Frame = -2

Query: 434 IDGTEPCPPKYVL----DASGNQTTQISPFFTSWMKKDQMLMIWINSTLSEEILPYVIGL 267
           IDG+ P P + V     + SG +T  I+P FTSW  +DQ+++  INS+LSEE+L  V+  
Sbjct: 55  IDGSLPAPRQTVAVDPAEGSGGRTIAINPEFTSWYHQDQLVLSVINSSLSEEVLATVVDA 114

Query: 266 PTSRALWNALETRFATLSRSHVLQLKSQLQDVKKEGSTMAEYLHKMKCITDALAASAAIV 87
            T+R  W+ LE  +A+ SR  ++Q++ QL  ++K   T AEY  K+K + D LAA    +
Sbjct: 115 TTARGAWSTLERMYASSSRVRIMQIRMQLATIQKGDLTAAEYFRKVKRLADTLAAVGKRL 174

Query: 86  DEGDLVFHTLKGLPKEYAAFCTSIRVR 6
           ++ + + + L+GLP +Y +  TSI  R
Sbjct: 175 EDEEFISYLLRGLPADYDSLVTSITTR 201


>ref|XP_002330417.1| predicted protein [Populus trichocarpa] gi|222871802|gb|EEF08933.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score =  108 bits (271), Expect = 3e-22
 Identities = 51/144 (35%), Positives = 89/144 (61%)
 Frame = -2

Query: 437 FIDGTEPCPPKYVLDASGNQTTQISPFFTSWMKKDQMLMIWINSTLSEEILPYVIGLPTS 258
           F+ GT PCPP++  +  G  TT++ P + +W ++DQM++ WIN++LS  +L  V    +S
Sbjct: 47  FVTGTNPCPPEFKSNTDGTITTEVDPRYATWHQQDQMILSWINNSLSPTVLSTVARFTSS 106

Query: 257 RALWNALETRFATLSRSHVLQLKSQLQDVKKEGSTMAEYLHKMKCITDALAASAAIVDEG 78
           +A W++LE R+A+ S++ +LQL+  L  VK EG ++++++ K+  I D LA +   VD+ 
Sbjct: 107 QATWSSLEKRYASQSKNRILQLRHDLLTVKGEGLSISDFVDKINQIADNLALAGKPVDDD 166

Query: 77  DLVFHTLKGLPKEYAAFCTSIRVR 6
           +LV   L  +   Y    +S + R
Sbjct: 167 ELVNIILNNVGPAYEVTVSSAQAR 190


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