BLASTX nr result

ID: Coptis23_contig00036785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036785
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510605.1| arginine/diaminopimelate/ornithine decarboxy...   160   8e-38
gb|AEQ02350.1| ornithine decarboxylase [Erythroxylum coca]            157   1e-36
ref|XP_003634343.1| PREDICTED: LOW QUALITY PROTEIN: ornithine de...   154   7e-36
ref|XP_002307756.1| predicted protein [Populus trichocarpa] gi|2...   154   1e-35
sp|P50134.1|DCOR_DATST RecName: Full=Ornithine decarboxylase; Sh...   150   1e-34

>ref|XP_002510605.1| arginine/diaminopimelate/ornithine decarboxylase, putative [Ricinus
           communis] gi|223551306|gb|EEF52792.1|
           arginine/diaminopimelate/ornithine decarboxylase,
           putative [Ricinus communis]
          Length = 97

 Score =  160 bits (406), Expect = 8e-38
 Identities = 73/93 (78%), Positives = 81/93 (87%)
 Frame = -1

Query: 371 LYDHATVKATPLACSSSRANPTCRGLRTYESTVFGPTCDALDTLLTGFQLPELQVNDWLV 192
           LYDHAT+  TPLACSS+RANPTC+GLRT+ STVFGPTCDALDT+L G  LPEL +NDWLV
Sbjct: 5   LYDHATITCTPLACSSNRANPTCKGLRTHSSTVFGPTCDALDTVLKGHPLPELHINDWLV 64

Query: 191 FPNMGAYTAAAGSNFNGFKTSAISTYLAFSTPT 93
           FPNMGAYTAAAGSNFNGF T AI TYL +S P+
Sbjct: 65  FPNMGAYTAAAGSNFNGFDTKAILTYLVYSNPS 97


>gb|AEQ02350.1| ornithine decarboxylase [Erythroxylum coca]
          Length = 413

 Score =  157 bits (396), Expect = 1e-36
 Identities = 72/92 (78%), Positives = 81/92 (88%)
 Frame = -1

Query: 371 LYDHATVKATPLACSSSRANPTCRGLRTYESTVFGPTCDALDTLLTGFQLPELQVNDWLV 192
           LYDHATV   PLAC+SSRANP C+G R Y STVFGPTCDALDT++TG  LP+LQV+DWLV
Sbjct: 322 LYDHATVTCKPLACTSSRANPMCKGARVYNSTVFGPTCDALDTVMTGHLLPDLQVSDWLV 381

Query: 191 FPNMGAYTAAAGSNFNGFKTSAISTYLAFSTP 96
           FPNMGAYTAAAGS+FNGFKT+AI TYLA+S P
Sbjct: 382 FPNMGAYTAAAGSSFNGFKTAAILTYLAYSNP 413


>ref|XP_003634343.1| PREDICTED: LOW QUALITY PROTEIN: ornithine decarboxylase [Vitis
           vinifera]
          Length = 411

 Score =  154 bits (389), Expect = 7e-36
 Identities = 71/93 (76%), Positives = 80/93 (86%)
 Frame = -1

Query: 371 LYDHATVKATPLACSSSRANPTCRGLRTYESTVFGPTCDALDTLLTGFQLPELQVNDWLV 192
           L DHATV A PLAC+S+  NPTCR +RTY STVFGPTCDALDT+LTG QLPELQVNDWL+
Sbjct: 319 LNDHATVTAKPLACTSNSVNPTCRRVRTYSSTVFGPTCDALDTVLTGHQLPELQVNDWLM 378

Query: 191 FPNMGAYTAAAGSNFNGFKTSAISTYLAFSTPT 93
           FP MGAYTAAAGSNFNGF  SA++T+L +S PT
Sbjct: 379 FPRMGAYTAAAGSNFNGFNMSAVTTHLVYSNPT 411


>ref|XP_002307756.1| predicted protein [Populus trichocarpa] gi|222857205|gb|EEE94752.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score =  154 bits (388), Expect = 1e-35
 Identities = 71/90 (78%), Positives = 80/90 (88%)
 Frame = -1

Query: 371 LYDHATVKATPLACSSSRANPTCRGLRTYESTVFGPTCDALDTLLTGFQLPELQVNDWLV 192
           LYDHAT+  TPLAC+S+ AN TC+GLR Y STVFGPTCDALDT+LTG QLPELQ+NDWLV
Sbjct: 324 LYDHATITCTPLACNSNHANLTCKGLRAYSSTVFGPTCDALDTVLTGHQLPELQINDWLV 383

Query: 191 FPNMGAYTAAAGSNFNGFKTSAISTYLAFS 102
           FPNMGAYTAAAGS+FNGF T+AI T+LA S
Sbjct: 384 FPNMGAYTAAAGSSFNGFNTAAILTHLASS 413


>sp|P50134.1|DCOR_DATST RecName: Full=Ornithine decarboxylase; Short=ODC
           gi|871008|emb|CAA61121.1| ornithine decarboxylase
           [Datura stramonium]
          Length = 431

 Score =  150 bits (378), Expect = 1e-34
 Identities = 69/93 (74%), Positives = 80/93 (86%)
 Frame = -1

Query: 371 LYDHATVKATPLACSSSRANPTCRGLRTYESTVFGPTCDALDTLLTGFQLPELQVNDWLV 192
           LYDHATV ATPLAC S+R+N  C G +T+ STVFGPTCDALDT+L  +QLPELQVNDWL+
Sbjct: 339 LYDHATVNATPLACMSNRSNLNCGGSKTFPSTVFGPTCDALDTVLRDYQLPELQVNDWLI 398

Query: 191 FPNMGAYTAAAGSNFNGFKTSAISTYLAFSTPT 93
           FPNMGAYT AAGSNFNGF TSAI T+LA++ P+
Sbjct: 399 FPNMGAYTKAAGSNFNGFNTSAIVTHLAYAYPS 431


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