BLASTX nr result

ID: Coptis23_contig00036782 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036782
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM08561.1|AC092749_14 Putative retroelement [Oryza sativa Ja...    84   2e-14
ref|NP_001176100.1| Os10g0351414 [Oryza sativa Japonica Group] g...    84   2e-14
ref|XP_002515858.1| conserved hypothetical protein [Ricinus comm...    84   2e-14
gb|EEE50811.1| hypothetical protein OsJ_31200 [Oryza sativa Japo...    84   2e-14
gb|EEC66781.1| hypothetical protein OsI_33174 [Oryza sativa Indi...    84   2e-14

>gb|AAM08561.1|AC092749_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1739

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/104 (41%), Positives = 60/104 (57%)
 Frame = +1

Query: 1    GRCPANRLQITHFLNMINATELMDLDFVGSIFTWSNKQQIPYRVLKRLDRGMCNVAWRNL 180
            G  P N+ +I  F + +N   LMD+ + G  +TWSNKQQ    VL+RLDR + NV W   
Sbjct: 920  GLAPPNQNRINIFKHHVNNLGLMDMGYNGPAYTWSNKQQGKDLVLERLDRCLANVEWCFN 979

Query: 181  HPDAKLFHQSTLCSDHKILVLKLNPNMIKLKRPFRFEAMWLSDP 312
            +P+  ++H   L SDH  ++  LNP   + KR F FE  WL +P
Sbjct: 980  YPNTTVYHLPMLYSDHAPIIAILNPKNRRPKRSFMFENWWLLEP 1023


>ref|NP_001176100.1| Os10g0351414 [Oryza sativa Japonica Group]
           gi|255679325|dbj|BAH94828.1| Os10g0351414 [Oryza sativa
           Japonica Group]
          Length = 912

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/104 (41%), Positives = 60/104 (57%)
 Frame = +1

Query: 1   GRCPANRLQITHFLNMINATELMDLDFVGSIFTWSNKQQIPYRVLKRLDRGMCNVAWRNL 180
           G  P N+ +I  F + +N   LMD+ + G  +TWSNKQQ    VL+RLDR + NV W   
Sbjct: 144 GLAPPNQNRINIFKHHVNNLGLMDMGYNGPAYTWSNKQQGKDLVLERLDRCLANVEWCFN 203

Query: 181 HPDAKLFHQSTLCSDHKILVLKLNPNMIKLKRPFRFEAMWLSDP 312
           +P+  ++H   L SDH  ++  LNP   + KR F FE  WL +P
Sbjct: 204 YPNTTVYHLPMLYSDHAPIIAILNPKNRRPKRSFMFENWWLLEP 247


>ref|XP_002515858.1| conserved hypothetical protein [Ricinus communis]
           gi|223545013|gb|EEF46527.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 269

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 44/111 (39%), Positives = 65/111 (58%)
 Frame = +1

Query: 1   GRCPANRLQITHFLNMINATELMDLDFVGSIFTWSNKQQIPYRVLKRLDRGMCNVAWRNL 180
           GR P ++ Q+  F + +N  EL+D+ F G+++TWSNKQ     V++RLDR + ++ WR  
Sbjct: 127 GRRPDDK-QLQLFSDFVNRNELIDVGFKGTMYTWSNKQLGDKCVMERLDRALASLEWRCQ 185

Query: 181 HPDAKLFHQSTLCSDHKILVLKLNPNMIKLKRPFRFEAMWLSDPSCQNVVK 333
            P+A++ H+  L SDH  LVL         KR FRFE  W     C+ VV+
Sbjct: 186 FPNAQIIHEYMLGSDHHPLVLMEQAGSFSKKRLFRFEEKWKLRDRCKEVVE 236


>gb|EEE50811.1| hypothetical protein OsJ_31200 [Oryza sativa Japonica Group]
          Length = 881

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/104 (41%), Positives = 60/104 (57%)
 Frame = +1

Query: 1   GRCPANRLQITHFLNMINATELMDLDFVGSIFTWSNKQQIPYRVLKRLDRGMCNVAWRNL 180
           G  P N+ +I  F + +N   LMD+ + G  +TWSNKQQ    VL+RLDR + NV W   
Sbjct: 8   GLAPPNQNRINIFKHHVNNLGLMDMGYNGPAYTWSNKQQGKDLVLERLDRCLANVEWCFN 67

Query: 181 HPDAKLFHQSTLCSDHKILVLKLNPNMIKLKRPFRFEAMWLSDP 312
           +P+  ++H   L SDH  ++  LNP   + KR F FE  WL +P
Sbjct: 68  YPNTTVYHLPMLYSDHAPIIAILNPKNRRPKRSFMFENWWLLEP 111


>gb|EEC66781.1| hypothetical protein OsI_33174 [Oryza sativa Indica Group]
          Length = 1144

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/104 (41%), Positives = 60/104 (57%)
 Frame = +1

Query: 1    GRCPANRLQITHFLNMINATELMDLDFVGSIFTWSNKQQIPYRVLKRLDRGMCNVAWRNL 180
            G  P N+ +I  F + +N   LMD+ + G  +TWSNKQQ    VL+RLDR + NV W   
Sbjct: 690  GLAPPNQNRINIFKHHVNNLGLMDMGYNGPAYTWSNKQQGKDLVLERLDRCLANVEWCFN 749

Query: 181  HPDAKLFHQSTLCSDHKILVLKLNPNMIKLKRPFRFEAMWLSDP 312
            +P+  ++H   L SDH  ++  LNP   + KR F FE  WL +P
Sbjct: 750  YPNTTVYHLPMLYSDHAPIIAILNPKNRRPKRSFMFENWWLLEP 793


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