BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036742
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                138   5e-31
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              124   6e-27
emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]   124   8e-27
emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]   123   2e-26
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]   122   4e-26

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  138 bits (347), Expect = 5e-31
 Identities = 71/122 (58%), Positives = 81/122 (66%)
 Frame = +2

Query: 5    TRSKNGINKPKTFYATKHPLPIAFXXXXXXXXXXXXXFKQVVKDPHWRSAMATEFNALLR 184
            TR+K GI+KPK F ATKH LP +              F Q  K  HW  AM  EF AL  
Sbjct: 1116 TRAKAGIHKPKVFTATKHQLP-STVDSLTALPPTPSTFLQASKSSHWMEAMQFEFQALQS 1174

Query: 185  TNTWILVPPDETQNVVDHKWVFRIKPKSDGSIDKYKARLVAKGFHQQKGLDFSETFSPVA 364
            T TW LVP   T N+V  KWVF++K K DG+I++YKARLVAKGFHQQ+GLDFSETFSPVA
Sbjct: 1175 TGTWELVPNHSTYNIVGCKWVFKVKHKPDGTIERYKARLVAKGFHQQEGLDFSETFSPVA 1234

Query: 365  KP 370
            KP
Sbjct: 1235 KP 1236


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score =  124 bits (312), Expect = 6e-27
 Identities = 62/121 (51%), Positives = 76/121 (62%)
 Frame = +2

Query: 5    TRSKNGINKPKTFYATKHPLPIAFXXXXXXXXXXXXXFKQVVKDPHWRSAMATEFNALLR 184
            TRSK+GI+KP   YA    L                 + Q  K P WR AM  EF AL +
Sbjct: 848  TRSKHGISKPNPKYAMHSTL--------LALPLEPTCYTQAAKYPEWREAMDHEFKALQQ 899

Query: 185  TNTWILVPPDETQNVVDHKWVFRIKPKSDGSIDKYKARLVAKGFHQQKGLDFSETFSPVA 364
              TW LVPP    N++ +KWVFRIK +SDGS+++YKARLVA GFHQQ+GLD++ETFSPV 
Sbjct: 900  AGTWFLVPPSSLMNILPNKWVFRIKKRSDGSVERYKARLVANGFHQQEGLDYTETFSPVV 959

Query: 365  K 367
            K
Sbjct: 960  K 960


>emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]
          Length = 1354

 Score =  124 bits (311), Expect = 8e-27
 Identities = 65/132 (49%), Positives = 82/132 (62%), Gaps = 9/132 (6%)
 Frame = +2

Query: 2    TTRSKNGINKP---------KTFYATKHPLPIAFXXXXXXXXXXXXXFKQVVKDPHWRSA 154
            TTR+KN I KP         K  + T  P  I+                Q +KD +WR A
Sbjct: 818  TTRAKNNITKPIQKLNLHTHKPTFQTTTPTSIS----------------QALKDQNWRQA 861

Query: 155  MATEFNALLRTNTWILVPPDETQNVVDHKWVFRIKPKSDGSIDKYKARLVAKGFHQQKGL 334
            M+ E++AL+R  TW LVPP++  N+V  KW+FRIK  SDGSID+YKARLVAKGFHQ+ G+
Sbjct: 862  MSDEYDALVRNGTWELVPPEDITNLVGCKWIFRIKRNSDGSIDRYKARLVAKGFHQRPGV 921

Query: 335  DFSETFSPVAKP 370
            D+ ETFSPV KP
Sbjct: 922  DYHETFSPVVKP 933


>emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]
          Length = 1427

 Score =  123 bits (308), Expect = 2e-26
 Identities = 64/129 (49%), Positives = 78/129 (60%), Gaps = 7/129 (5%)
 Frame = +2

Query: 5    TRSKNGINKPK-------TFYATKHPLPIAFXXXXXXXXXXXXXFKQVVKDPHWRSAMAT 163
            TRS+N I+ PK       +F+ TKHPLP +                Q +KDP W + M  
Sbjct: 865  TRSQNNIHCPKQFPDFKTSFHVTKHPLPXSLEPTTA---------SQALKDPKWCAXMDD 915

Query: 164  EFNALLRTNTWILVPPDETQNVVDHKWVFRIKPKSDGSIDKYKARLVAKGFHQQKGLDFS 343
            E  AL R  TW+LVPP    N+V  KWVFRIK   DGSI +YKARLVAKGFHQ+ G+D+ 
Sbjct: 916  ELAALARNCTWVLVPPPSNHNIVGCKWVFRIKRNPDGSISRYKARLVAKGFHQRPGVDYH 975

Query: 344  ETFSPVAKP 370
            +TFSPV KP
Sbjct: 976  DTFSPVVKP 984


>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
          Length = 1131

 Score =  122 bits (305), Expect = 4e-26
 Identities = 63/127 (49%), Positives = 79/127 (62%), Gaps = 4/127 (3%)
 Frame = +2

Query: 2    TTRSKNGINKPKTFYA-TK---HPLPIAFXXXXXXXXXXXXXFKQVVKDPHWRSAMATEF 169
            TTR+KNGI KPK F + TK   HPL                 FK+ VK P W+ AM  EF
Sbjct: 731  TTRAKNGIFKPKIFLSPTKTIFHPL------------CEPNSFKEAVKVPEWQQAMHLEF 778

Query: 170  NALLRTNTWILVPPDETQNVVDHKWVFRIKPKSDGSIDKYKARLVAKGFHQQKGLDFSET 349
             AL+   TW+LVPP   QN++   WV+++K K DG++++YKARLVAKGFHQ    D+ ET
Sbjct: 779  EALMSNKTWVLVPPPPNQNIIGCHWVYKLKYKPDGTVERYKARLVAKGFHQTPSFDYFET 838

Query: 350  FSPVAKP 370
            FSPV KP
Sbjct: 839  FSPVVKP 845