BLASTX nr result

ID: Coptis23_contig00036731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036731
         (772 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305221.1| predicted protein [Populus trichocarpa] gi|2...    99   1e-18
ref|XP_002302939.1| predicted protein [Populus trichocarpa] gi|2...    97   3e-18
emb|CAN75247.1| hypothetical protein VITISV_027237 [Vitis vinifera]    92   9e-17
ref|XP_003616262.1| hypothetical protein MTR_5g077940 [Medicago ...    83   7e-14
ref|XP_003600698.1| hypothetical protein MTR_3g065210 [Medicago ...    78   2e-12

>ref|XP_002305221.1| predicted protein [Populus trichocarpa] gi|222848185|gb|EEE85732.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 68/168 (40%), Positives = 93/168 (55%), Gaps = 13/168 (7%)
 Frame = -3

Query: 686 MERRKSRAG--TDELA-TKAAAWAWYQRGLVSEGKLMQEFGIRRIHRVPRPSRFKLEYMK 516
           ME++K + G  TD+LA  KAAAWAWY  G  SEG+ + EF + R  + PRPSR+KLE   
Sbjct: 11  MEKKKPKGGGSTDDLALVKAAAWAWYHHGSGSEGRPICEFDVTRTRQAPRPSRYKLE--- 67

Query: 515 RTDETMENXXXXXXXXXSPTHSENSLLDQYEIEMISKHLDRLLEADRGIIHGACTN--DQ 342
            T    E+         SP  ++NSLLD+YE+E ISK LD L+E+     +G   +  D 
Sbjct: 68  ATRTMKEDTMGSGSETPSPIRTDNSLLDKYEVESISKQLDYLIESSSNRFYGFKIDHLDH 127

Query: 341 DHRKKQSLQEND----KHRKIIRKISNKVWLR----RTPALCGSKGDV 222
           D R   SL  +     K +K  +K   K +L+    R   +CG+KGDV
Sbjct: 128 DQRSISSLDSDQTGGMKQKKKDKK--KKTFLQGFWPRHSVVCGTKGDV 173


>ref|XP_002302939.1| predicted protein [Populus trichocarpa] gi|222844665|gb|EEE82212.1|
           predicted protein [Populus trichocarpa]
          Length = 170

 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 69/170 (40%), Positives = 91/170 (53%), Gaps = 14/170 (8%)
 Frame = -3

Query: 686 MERRKSRAGT---DELATKAAAWAWYQRGLVSEGKLMQEFGIRRIHRVPRPSRFKLEYMK 516
           ME++K + G    D    KAAAWAWYQ G  SEGK M E  +    + PRPSR+KLE M+
Sbjct: 1   MEKKKPKGGDSTGDLTLVKAAAWAWYQHGSGSEGKPMCESYVTSTRQAPRPSRYKLEDMR 60

Query: 515 R--TDETMENXXXXXXXXXSPTHSENSLLDQYEIEMISKHLDRLLEADRGIIHGACTNDQ 342
               ++TM+          SP  ++NSLLD YE+E ISKHLD L+E+     +G    D+
Sbjct: 61  LRVKEDTMDG-----SGAPSPIGADNSLLDNYEVESISKHLDYLMESSSKRSYGVEIFDR 115

Query: 341 D---HRKKQ-SLQEND-----KHRKIIRKISNKVWLRRTPALCGSKGDVV 219
           D   HR K  SL   D     K +K   K   + W  R   +CG++ DVV
Sbjct: 116 DDHLHRGKSISLLHGDQTCGMKQKKNKSKFFLQGWWLRHSVVCGTREDVV 165


>emb|CAN75247.1| hypothetical protein VITISV_027237 [Vitis vinifera]
          Length = 247

 Score = 92.4 bits (228), Expect = 9e-17
 Identities = 59/129 (45%), Positives = 71/129 (55%), Gaps = 9/129 (6%)
 Frame = -3

Query: 686 MERRKSRAGTDELAT-KAAAWAWYQRGLVSEGKLMQEFGIRRIHRVPRPSRFKLEYMKRT 510
           MERRKSR   D LAT KAAAWAWYQRG  SEGK + EF + R      PSR+KLE M+  
Sbjct: 1   MERRKSRVSLDPLATVKAAAWAWYQRGSGSEGKPISEFQVTRARPALIPSRYKLEAMRMA 60

Query: 509 DETME-NXXXXXXXXXSPTHSENSLLDQYEIEMISKHLDRLLEAD-------RGIIHGAC 354
           +E  E           +P  S  SLLD YEIE IS+ LD L+E           +  G+ 
Sbjct: 61  EEGPEKEGSSASSATSTPNLSHTSLLDTYEIERISQQLDILIETSGKGIRTGTNLYKGSG 120

Query: 353 TNDQDHRKK 327
           TN +  +KK
Sbjct: 121 TNSRKEKKK 129


>ref|XP_003616262.1| hypothetical protein MTR_5g077940 [Medicago truncatula]
           gi|355517597|gb|AES99220.1| hypothetical protein
           MTR_5g077940 [Medicago truncatula]
          Length = 183

 Score = 82.8 bits (203), Expect = 7e-14
 Identities = 58/162 (35%), Positives = 85/162 (52%), Gaps = 5/162 (3%)
 Frame = -3

Query: 656 DELATKAAAWAWYQRGLVS--EGKL-MQEFGIRR--IHRVPRPSRFKLEYMKRTDETMEN 492
           D    KAAAWAW+QRG  S  EG+     F + R  IHR PRPSR+KLE M+  ++   +
Sbjct: 29  DIAIVKAAAWAWHQRGSGSCNEGEANSSNFYVTRSNIHREPRPSRYKLEAMRSMEKEEIH 88

Query: 491 XXXXXXXXXSPTHSENSLLDQYEIEMISKHLDRLLEADRGIIHGACTNDQDHRKKQSLQE 312
                         E SLLD YE++ IS+HL+RL+E+++        N  D+    S+ +
Sbjct: 89  K------------KEKSLLDAYEVQSISRHLNRLIESNK------LVNSTDNIASTSVDD 130

Query: 311 NDKHRKIIRKISNKVWLRRTPALCGSKGDVVEPRTMRRKHRQ 186
             K  K  +K   K +  +   +CG  GDVV+P ++ R  R+
Sbjct: 131 GVKRTK--KKKIRKGFFHKHGVVCGRLGDVVDPTSVSRDGRR 170


>ref|XP_003600698.1| hypothetical protein MTR_3g065210 [Medicago truncatula]
           gi|355489746|gb|AES70949.1| hypothetical protein
           MTR_3g065210 [Medicago truncatula]
          Length = 181

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 57/170 (33%), Positives = 83/170 (48%), Gaps = 8/170 (4%)
 Frame = -3

Query: 686 MERRKS---RAGTDELA-TKAAAWAWYQRGLVSEGKLMQ-EFGIRRIHRVPRPSRFKLEY 522
           ME+++    +   DELA  KAAAWAWYQ G  SE K    EF + R  R PRPSR+KLE 
Sbjct: 12  MEKKRKPQPQESRDELALVKAAAWAWYQHGSRSERKKSSNEFDVTRTQRSPRPSRYKLEA 71

Query: 521 MKRTDETMENXXXXXXXXXSPTHSENSLLDQYEIEMISKHLDRLLEADRGIIHGACTNDQ 342
           M+  + T                +  SLLD YE++ IS+  D L++          ++++
Sbjct: 72  MRMAEVT---DLTCNGLEVGTIANNKSLLDTYEVQSISRQFDSLID----------SSNK 118

Query: 341 DHRKKQSLQENDKHRKIIRK---ISNKVWLRRTPALCGSKGDVVEPRTMR 201
            H      + +D +R+I  K   I+ K +  R   +CG   DVV    +R
Sbjct: 119 QHMDGNCAKNDDGNRRINNKKRFINFKGFWSRNVVVCGGGNDVVHGSALR 168


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