BLASTX nr result

ID: Coptis23_contig00036676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036676
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301881.1| SAUR family protein [Populus trichocarpa] gi...    96   4e-18
ref|NP_175002.1| putative auxin-responsive protein [Arabidopsis ...    91   7e-17
ref|XP_002891252.1| hypothetical protein ARALYDRAFT_891317 [Arab...    91   7e-17
ref|NP_199056.1| SAUR-like auxin-responsive protein [Arabidopsis...    86   2e-15
ref|XP_002865529.1| auxin-responsive family protein [Arabidopsis...    84   2e-14

>ref|XP_002301881.1| SAUR family protein [Populus trichocarpa]
           gi|222843607|gb|EEE81154.1| SAUR family protein [Populus
           trichocarpa]
          Length = 100

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 49/83 (59%), Positives = 60/83 (72%), Gaps = 11/83 (13%)
 Frame = +1

Query: 64  MSSLLKKILCCGMKSFPSAD----------LPEGRVRVYVGKD-VPCKFELEANYLNHPL 210
           MS +++K+ CCG K FPSAD           PEG VRV VGKD V C+FE+EA++LNHPL
Sbjct: 1   MSGIVRKLWCCGAKGFPSADDSAEDQLALPPPEGHVRVCVGKDNVQCRFEMEAHFLNHPL 60

Query: 211 FENLLELSVDEFGYSYNGALRIA 279
           FE+LL LS  E GY+Y+GALRIA
Sbjct: 61  FEDLLRLSEQEHGYAYDGALRIA 83


>ref|NP_175002.1| putative auxin-responsive protein [Arabidopsis thaliana]
           gi|12321539|gb|AAG50826.1|AC026757_7 auxin-induced
           protein, putative [Arabidopsis thaliana]
           gi|67633428|gb|AAY78639.1| putative auxin-responsive
           protein [Arabidopsis thaliana]
           gi|332193822|gb|AEE31943.1| putative auxin-responsive
           protein [Arabidopsis thaliana]
          Length = 104

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 47/73 (64%), Positives = 59/73 (80%), Gaps = 4/73 (5%)
 Frame = +1

Query: 73  LLKKILCCGMKSFPS-ADLP-EGRVRVYVG--KDVPCKFELEANYLNHPLFENLLELSVD 240
           ++KK+LCCG KSF   A LP EGRVRVYVG  +D  CK E++A++L HPLFE+LL LS +
Sbjct: 1   MVKKLLCCGAKSFSQRARLPDEGRVRVYVGNDRDTQCKLEMDADFLTHPLFEDLLRLSEE 60

Query: 241 EFGYSYNGALRIA 279
           EFG+SY+GALRIA
Sbjct: 61  EFGHSYDGALRIA 73


>ref|XP_002891252.1| hypothetical protein ARALYDRAFT_891317 [Arabidopsis lyrata subsp.
           lyrata] gi|297337094|gb|EFH67511.1| hypothetical protein
           ARALYDRAFT_891317 [Arabidopsis lyrata subsp. lyrata]
          Length = 103

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 47/73 (64%), Positives = 59/73 (80%), Gaps = 4/73 (5%)
 Frame = +1

Query: 73  LLKKILCCGMKSFPS-ADLPE-GRVRVYVG--KDVPCKFELEANYLNHPLFENLLELSVD 240
           ++KK+LCCG KSF   A LPE GRVRVYVG  +D  CK E++A++L HPLFE+LL LS +
Sbjct: 1   MVKKLLCCGAKSFSQRARLPEEGRVRVYVGNDRDTQCKLEMDADFLTHPLFEDLLRLSEE 60

Query: 241 EFGYSYNGALRIA 279
           EFG+SY+GALRIA
Sbjct: 61  EFGHSYDGALRIA 73


>ref|NP_199056.1| SAUR-like auxin-responsive protein [Arabidopsis thaliana]
           gi|9759477|dbj|BAB10482.1| unnamed protein product
           [Arabidopsis thaliana] gi|332007424|gb|AED94807.1|
           SAUR-like auxin-responsive protein [Arabidopsis
           thaliana]
          Length = 111

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 48/78 (61%), Positives = 58/78 (74%), Gaps = 6/78 (7%)
 Frame = +1

Query: 64  MSSLLKKILCCGMKSFPSAD---LPE-GRVRVYVGKDVP--CKFELEANYLNHPLFENLL 225
           M +L+KK+L CG K+  S+    LPE GRVRVYVGKD    CK E+EAN LNHP+ E+LL
Sbjct: 1   MRTLVKKLLWCGAKNISSSRTSALPEEGRVRVYVGKDKESQCKLEVEANLLNHPMLEDLL 60

Query: 226 ELSVDEFGYSYNGALRIA 279
            LS +EFG+SY GALRIA
Sbjct: 61  RLSEEEFGHSYEGALRIA 78


>ref|XP_002865529.1| auxin-responsive family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297311364|gb|EFH41788.1| auxin-responsive family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 111

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 47/78 (60%), Positives = 58/78 (74%), Gaps = 6/78 (7%)
 Frame = +1

Query: 64  MSSLLKKILCCGMKSFPSAD---LPE-GRVRVYVGKD--VPCKFELEANYLNHPLFENLL 225
           M S++KK+L CG K+  S+    LPE GRVRV+VGKD    CK E+EAN LNHP+ E+LL
Sbjct: 1   MRSVVKKLLWCGAKNNASSRTSALPEEGRVRVFVGKDRESQCKLEVEANLLNHPMLEDLL 60

Query: 226 ELSVDEFGYSYNGALRIA 279
            LS +EFG+SY GALRIA
Sbjct: 61  RLSEEEFGHSYEGALRIA 78


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