BLASTX nr result

ID: Coptis23_contig00036662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036662
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513447.1| conserved hypothetical protein [Ricinus comm...   125   4e-27
ref|XP_003597478.1| Bifunctional protein aas [Medicago truncatul...   125   5e-27
tpg|DAA37344.1| TPA: putative AMP-dependent synthetase and ligas...   123   2e-26
emb|CBI16432.3| unnamed protein product [Vitis vinifera]              123   2e-26
ref|XP_002283091.1| PREDICTED: uncharacterized protein LOC100253...   123   2e-26

>ref|XP_002513447.1| conserved hypothetical protein [Ricinus communis]
            gi|223547355|gb|EEF48850.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2278

 Score =  125 bits (314), Expect = 4e-27
 Identities = 61/94 (64%), Positives = 69/94 (73%)
 Frame = +3

Query: 3    RIDARGAALRILHXXXXXXXXXXXXXXXXXXXXKTGKAFYARTIADFATWLVCGLAAREE 182
            RIDARGAA+R+L                     KTGKAFYART+ DFATWLVCGL AREE
Sbjct: 1763 RIDARGAAIRLLSDEKEIGASFSLLDITL----KTGKAFYARTVGDFATWLVCGLPAREE 1818

Query: 183  YVKRAPHVRDAVWDSLRNADSYAELHYYSNVCRI 284
            +VKR PH+RDAVW SLRN+DSYAELHYYSN+CR+
Sbjct: 1819 FVKRVPHIRDAVWMSLRNSDSYAELHYYSNICRL 1852


>ref|XP_003597478.1| Bifunctional protein aas [Medicago truncatula]
            gi|355486526|gb|AES67729.1| Bifunctional protein aas
            [Medicago truncatula]
          Length = 2339

 Score =  125 bits (313), Expect = 5e-27
 Identities = 61/95 (64%), Positives = 69/95 (72%)
 Frame = +3

Query: 3    RIDARGAALRILHXXXXXXXXXXXXXXXXXXXXKTGKAFYARTIADFATWLVCGLAAREE 182
            RIDARGAALRI                      KTG AFYART+ADFA+WLVCGLAAREE
Sbjct: 1811 RIDARGAALRIFSDEPATDSSDSPPPTLIDLTLKTGNAFYARTLADFASWLVCGLAAREE 1870

Query: 183  YVKRAPHVRDAVWDSLRNADSYAELHYYSNVCRIL 287
             VK APHVR+AVW+SLR+ADSYAE+HYYSN CR++
Sbjct: 1871 LVKSAPHVREAVWNSLRHADSYAEMHYYSNYCRLM 1905


>tpg|DAA37344.1| TPA: putative AMP-dependent synthetase and ligase superfamily protein
            [Zea mays]
          Length = 2404

 Score =  123 bits (308), Expect = 2e-26
 Identities = 61/95 (64%), Positives = 69/95 (72%)
 Frame = +3

Query: 3    RIDARGAALRILHXXXXXXXXXXXXXXXXXXXXKTGKAFYARTIADFATWLVCGLAAREE 182
            R+DARGAA+RIL                     K+GKAFYARTIADFATWLVCGL ARE+
Sbjct: 1889 RLDARGAAVRILSDDGEVPLLDLTL--------KSGKAFYARTIADFATWLVCGLPARED 1940

Query: 183  YVKRAPHVRDAVWDSLRNADSYAELHYYSNVCRIL 287
             VKRAPH+RDAVW SLRN DSY +LHYYSN+CR+L
Sbjct: 1941 QVKRAPHIRDAVWGSLRNTDSYTKLHYYSNICRLL 1975


>emb|CBI16432.3| unnamed protein product [Vitis vinifera]
          Length = 2221

 Score =  123 bits (308), Expect = 2e-26
 Identities = 64/94 (68%), Positives = 68/94 (72%)
 Frame = +3

Query: 3    RIDARGAALRILHXXXXXXXXXXXXXXXXXXXXKTGKAFYARTIADFATWLVCGLAAREE 182
            RIDARGAALRIL                     KTG AFYARTIADFATWLVCGLAAREE
Sbjct: 1708 RIDARGAALRIL------PDEPGSDSPLLDLTLKTGNAFYARTIADFATWLVCGLAAREE 1761

Query: 183  YVKRAPHVRDAVWDSLRNADSYAELHYYSNVCRI 284
            +VKR P VRDAVW SLR ADS+AELHYYSN+CR+
Sbjct: 1762 HVKRIPRVRDAVWASLRRADSFAELHYYSNICRL 1795


>ref|XP_002283091.1| PREDICTED: uncharacterized protein LOC100253550 [Vitis vinifera]
          Length = 2289

 Score =  123 bits (308), Expect = 2e-26
 Identities = 64/94 (68%), Positives = 68/94 (72%)
 Frame = +3

Query: 3    RIDARGAALRILHXXXXXXXXXXXXXXXXXXXXKTGKAFYARTIADFATWLVCGLAAREE 182
            RIDARGAALRIL                     KTG AFYARTIADFATWLVCGLAAREE
Sbjct: 1776 RIDARGAALRIL------PDEPGSDSPLLDLTLKTGNAFYARTIADFATWLVCGLAAREE 1829

Query: 183  YVKRAPHVRDAVWDSLRNADSYAELHYYSNVCRI 284
            +VKR P VRDAVW SLR ADS+AELHYYSN+CR+
Sbjct: 1830 HVKRIPRVRDAVWASLRRADSFAELHYYSNICRL 1863


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