BLASTX nr result

ID: Coptis23_contig00036636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036636
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310155.1| predicted protein [Populus trichocarpa] gi|2...   113   2e-23
ref|XP_002307256.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_003538818.1| PREDICTED: uncharacterized protein LOC100814...   104   9e-21
ref|XP_003516598.1| PREDICTED: uncharacterized protein LOC100795...    99   4e-19
ref|XP_002522310.1| hypothetical protein RCOM_0601570 [Ricinus c...    91   1e-16

>ref|XP_002310155.1| predicted protein [Populus trichocarpa] gi|222853058|gb|EEE90605.1|
           predicted protein [Populus trichocarpa]
          Length = 1225

 Score =  113 bits (282), Expect = 2e-23
 Identities = 65/137 (47%), Positives = 91/137 (66%), Gaps = 3/137 (2%)
 Frame = -3

Query: 403 SFLNVEEWLDIRSGQDDFPLMELRPHRSWEISPHSTETIMEMNFLSGFEGKLFGAFSMKL 224
           S L V++WL +RS Q+ FP M +RP  +WEI PHS+ETIME++F    EG +FGAF M+L
Sbjct: 374 SHLGVKDWLVVRSAQNGFPWMAMRPQENWEIGPHSSETIMEIDFSVESEGNVFGAFCMQL 433

Query: 223 QSSS--RTDTIVLPLEAEVRHKPAYSDLTGSVIVYLESVPCDGCETSII-LSLENRAANL 53
             SS  RTDT++ PLE E+  K AY+ ++GSV  +   VP D   T ++ ++L NRA ++
Sbjct: 434 LRSSQDRTDTVMFPLELELDGKVAYNGISGSV-SFETLVPYDVGNTVVVAIALRNRAPHV 492

Query: 52  LHFAKISEVTENEKIFR 2
           L   KISEV    K+F+
Sbjct: 493 LSVVKISEVAA-AKVFQ 508


>ref|XP_002307256.1| predicted protein [Populus trichocarpa] gi|222856705|gb|EEE94252.1|
           predicted protein [Populus trichocarpa]
          Length = 1352

 Score =  107 bits (266), Expect = 1e-21
 Identities = 61/130 (46%), Positives = 83/130 (63%), Gaps = 4/130 (3%)
 Frame = -3

Query: 403 SFLNVEEWLDIRSGQDDFPLMELRPHRSWEISPHSTETIMEMNFLSGFEGKLFGAFSMKL 224
           S L V++WL +R+ Q  FPLM ++P  SWEI PHS+ TIMEM+F    EG ++GAF M+L
Sbjct: 403 SLLGVKDWLVVRNAQMGFPLMAMKPQESWEILPHSSGTIMEMDFSFESEGNVYGAFCMQL 462

Query: 223 QSSS--RTDTIVLPLEAEVRHKPAYSDLTGSVIVYLES-VPCD-GCETSIILSLENRAAN 56
             SS  +TDT+++PLE E   K AYS   G V V LE+ VP D G    + +SL N A +
Sbjct: 463 LRSSQDKTDTVMVPLELEWDGKVAYSGFAGLVSVSLETLVPYDVGSTVVVAISLRNEAPH 522

Query: 55  LLHFAKISEV 26
           +L+   + EV
Sbjct: 523 VLNVVNVREV 532


>ref|XP_003538818.1| PREDICTED: uncharacterized protein LOC100814143 [Glycine max]
          Length = 1288

 Score =  104 bits (259), Expect = 9e-21
 Identities = 57/136 (41%), Positives = 87/136 (63%), Gaps = 3/136 (2%)
 Frame = -3

Query: 400 FLNVEEWLDIRSGQDDFPLMELRPHRSWEISPHSTETIMEMNFLSGFEGKLFGAFSMKL- 224
           F  +++ L + SGQ    ++ +RPHR+W+I+PH +ET+MEM+ L GFEGK+FGAF + L 
Sbjct: 380 FPTIKDRLVVNSGQFGSLIVAIRPHRNWDIAPHGSETLMEMDILVGFEGKIFGAFCLHLL 439

Query: 223 -QSSSRTDTIVLPLEAEVRHKPAYSDLTGSVIVYLESVP-CDGCETSIILSLENRAANLL 50
             S   +DTI++P+EAEV    A+  +   +   LE +  CD  E +I +SL N A  +L
Sbjct: 440 RHSQDTSDTIMVPIEAEVDSHSAHDTVGIFISATLEGLAMCDSGEIAIAISLRNDAPYVL 499

Query: 49  HFAKISEVTENEKIFR 2
            F K+ EV++  K+FR
Sbjct: 500 SFVKVIEVSDT-KLFR 514


>ref|XP_003516598.1| PREDICTED: uncharacterized protein LOC100795770 [Glycine max]
          Length = 1311

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 55/136 (40%), Positives = 85/136 (62%), Gaps = 3/136 (2%)
 Frame = -3

Query: 400 FLNVEEWLDIRSGQDDFPLMELRPHRSWEISPHSTETIMEMNFLSGFEGKLFGAFSMKL- 224
           F  +++ L + SG    P++ +RPHR+W+I+PH +E +MEM+ + GFEGK+FGAF + L 
Sbjct: 380 FPTIKDRLVVNSGHS--PMIAIRPHRNWDIAPHGSENLMEMDIMVGFEGKIFGAFCLHLL 437

Query: 223 -QSSSRTDTIVLPLEAEVRHKPAYSDLTGSVIVYLESV-PCDGCETSIILSLENRAANLL 50
             S   +DTI++P+EAEV    A   +   +   LE +  CD  E +I +SL N A  +L
Sbjct: 438 RPSQDTSDTIMVPIEAEVDSHSACDTVGIFISATLEGLATCDSGEIAITISLRNDAPYVL 497

Query: 49  HFAKISEVTENEKIFR 2
            F K+ EV++ E +FR
Sbjct: 498 GFVKVMEVSDTE-LFR 512


>ref|XP_002522310.1| hypothetical protein RCOM_0601570 [Ricinus communis]
           gi|223538388|gb|EEF39994.1| hypothetical protein
           RCOM_0601570 [Ricinus communis]
          Length = 1345

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 51/129 (39%), Positives = 80/129 (62%), Gaps = 3/129 (2%)
 Frame = -3

Query: 403 SFLNVEEWLDIRSGQDDFPLMELRPHRSWEISPHSTETIMEMNFLSGFEGKLFGAFSMKL 224
           S LNVE+WL ++S     PLM +RPH +W+I P+  E +++++F    E  + GA  ++L
Sbjct: 407 SLLNVEDWLIVKSDLVGSPLMAMRPHENWDIGPYGCEAVIDIDFSFESEAHILGALCVQL 466

Query: 223 QSSS--RTDTIVLPLEAEVRHKPAYSDLTGSVIVYLES-VPCDGCETSIILSLENRAANL 53
             SS  + DTI++PLE ++  K A + +T  V V LE+ +P    +T I +SL N A+++
Sbjct: 467 LRSSQDKPDTILVPLEIDLDGKVAGNGITDLVSVSLEALLPSHSSKTLIAISLRNGASHV 526

Query: 52  LHFAKISEV 26
           L   KISEV
Sbjct: 527 LRVVKISEV 535


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