BLASTX nr result

ID: Coptis23_contig00036564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036564
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269115.2| PREDICTED: uncharacterized protein LOC100254...    79   3e-13
ref|XP_002302693.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
ref|XP_003597707.1| hypothetical protein MTR_2g101420 [Medicago ...    75   7e-12
gb|ABR16063.1| unknown [Picea sitchensis]                              72   4e-11
ref|XP_002882092.1| hypothetical protein ARALYDRAFT_904162 [Arab...    70   2e-10

>ref|XP_002269115.2| PREDICTED: uncharacterized protein LOC100254125 [Vitis vinifera]
           gi|296089047|emb|CBI38750.3| unnamed protein product
           [Vitis vinifera]
          Length = 719

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/66 (59%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
 Frame = -1

Query: 334 VSGIQVPRQKYISVSKSDILTAILSSSIMFQD-SNFTRFASCLDSVIHAEHKAILEEMRT 158
           +SGIQVPRQKYI +SKSD+L AI+      QD  +F   +SCLDS++HAEHK +LEEMR 
Sbjct: 76  LSGIQVPRQKYIPISKSDLLDAIVLKFDSQQDVDHFLLLSSCLDSILHAEHKNVLEEMRI 135

Query: 157 DYPFSH 140
            YP +H
Sbjct: 136 SYPLTH 141


>ref|XP_002302693.1| predicted protein [Populus trichocarpa] gi|222844419|gb|EEE81966.1|
           predicted protein [Populus trichocarpa]
          Length = 697

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 37/68 (54%), Positives = 50/68 (73%), Gaps = 3/68 (4%)
 Frame = -1

Query: 334 VSGIQVPRQKYISVSKSDILTAILSSSIMFQDSNFTRF---ASCLDSVIHAEHKAILEEM 164
           +S IQV R+KYI VSK+++L A+L      QD +  +F   +SCLDS++HAEHK+ILEEM
Sbjct: 86  ISKIQVSREKYIPVSKAELLDAVLLKLFDSQDDDANQFLLLSSCLDSILHAEHKSILEEM 145

Query: 163 RTDYPFSH 140
           RTDY  +H
Sbjct: 146 RTDYSLTH 153


>ref|XP_003597707.1| hypothetical protein MTR_2g101420 [Medicago truncatula]
           gi|355486755|gb|AES67958.1| hypothetical protein
           MTR_2g101420 [Medicago truncatula]
          Length = 739

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 39/63 (61%), Positives = 51/63 (80%), Gaps = 2/63 (3%)
 Frame = -1

Query: 334 VSGIQVPRQKYISVSKSDILTAILSSSIMFQDS--NFTRFASCLDSVIHAEHKAILEEMR 161
           +S IQVPRQK+I VSKS +L AILS+ ++ QD+  +F    SCLDS++HAEHK+ILEEMR
Sbjct: 95  ISKIQVPRQKHIPVSKSQLLDAILSN-MLHQDTAHHFRLLTSCLDSILHAEHKSILEEMR 153

Query: 160 TDY 152
           +DY
Sbjct: 154 SDY 156


>gb|ABR16063.1| unknown [Picea sitchensis]
          Length = 769

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/69 (52%), Positives = 50/69 (72%), Gaps = 2/69 (2%)
 Frame = -1

Query: 340 DEVSGIQVPRQKYISVSKSDILTAILSSSIMFQDS--NFTRFASCLDSVIHAEHKAILEE 167
           + +SGI VPRQ+YI +SK D+L A+LS     +D+  +F    SCLDS++HAEHK+ILEE
Sbjct: 102 ESISGIPVPRQRYIPISKVDLLHALLSLFHNDKDAQEDFLAIYSCLDSILHAEHKSILEE 161

Query: 166 MRTDYPFSH 140
           MR DY  ++
Sbjct: 162 MRLDYSLTY 170


>ref|XP_002882092.1| hypothetical protein ARALYDRAFT_904162 [Arabidopsis lyrata subsp.
           lyrata] gi|297327931|gb|EFH58351.1| hypothetical protein
           ARALYDRAFT_904162 [Arabidopsis lyrata subsp. lyrata]
          Length = 703

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 17/128 (13%)
 Frame = -1

Query: 334 VSGIQVPRQKYISVSKSDILTAILSSSIMFQDSN---FTRFASCLDSVIHAEHKAILEEM 164
           +S I VPR+KYI++SKSD++  I++  +  QD +   F   +SCLDS++HAEHK ILE+M
Sbjct: 95  ISSIHVPREKYINLSKSDLVNGIVTKLLDSQDGDTDIFILLSSCLDSILHAEHKRILEQM 154

Query: 163 RTDYPFSHXXXXXXXXXXXXXXXXXXXXPAP------------KDNSNTATDS--SASRF 26
           R D+  +                      A             KD    + +S  +A+RF
Sbjct: 155 RADFVATQSLEENSEPRSVNGYDGLSFPLADGFDIWNFLISSGKDAKKRSAESVMAATRF 214

Query: 25  QRAFLNLL 2
           QR+F+ LL
Sbjct: 215 QRSFIQLL 222


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