BLASTX nr result

ID: Coptis23_contig00036556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036556
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273113.2| PREDICTED: uncharacterized membrane protein ...   161   6e-38
emb|CBI22668.3| unnamed protein product [Vitis vinifera]              159   3e-37
ref|XP_002272875.1| PREDICTED: uncharacterized membrane protein ...   159   3e-37
ref|XP_002513660.1| conserved hypothetical protein [Ricinus comm...   157   8e-37
emb|CAN74772.1| hypothetical protein VITISV_024875 [Vitis vinifera]   157   1e-36

>ref|XP_002273113.2| PREDICTED: uncharacterized membrane protein yjcL-like [Vitis
           vinifera] gi|302143806|emb|CBI22667.3| unnamed protein
           product [Vitis vinifera]
          Length = 449

 Score =  161 bits (407), Expect = 6e-38
 Identities = 80/130 (61%), Positives = 102/130 (78%), Gaps = 5/130 (3%)
 Frame = -2

Query: 432 VKVKAQLNFPLIPPQDHWGTFSVLFATAAFGIWSDTTKVGCTVSGAVVSTLGGLAASNLG 253
           V V++ L FP+I PQD WGT++ LFAT AFGIWS+ TK+G  +SGA+VSTL GLAASNLG
Sbjct: 65  VTVRSSLTFPIISPQDQWGTWTALFATGAFGIWSEKTKIGSALSGALVSTLVGLAASNLG 124

Query: 252 IISNEAPAYSVVMEYLLPITIPLLLFKADLGRVVQSTGKMLLAFLLGS-----GHILASI 88
           IIS EAPAYSVV+ +LLP+ +PLLLF+ADL RV+QSTG +L+AFL+GS     G ++A +
Sbjct: 125 IISCEAPAYSVVLNFLLPLAVPLLLFRADLRRVIQSTGALLMAFLIGSVATTIGTVVAFL 184

Query: 87  LCPFSSLSVD 58
           + P  SL  D
Sbjct: 185 MVPMRSLGQD 194


>emb|CBI22668.3| unnamed protein product [Vitis vinifera]
          Length = 1178

 Score =  159 bits (401), Expect = 3e-37
 Identities = 79/130 (60%), Positives = 104/130 (80%), Gaps = 5/130 (3%)
 Frame = -2

Query: 432 VKVKAQLNFPLIPPQDHWGTFSVLFATAAFGIWSDTTKVGCTVSGAVVSTLGGLAASNLG 253
           VKV++QL+ P+I P+DHWGT++ LFAT AFG+WS+ TK+G  VS A+VS L G+AASNLG
Sbjct: 58  VKVRSQLSGPIISPEDHWGTWTALFATGAFGLWSEKTKIGSMVSAALVSILVGMAASNLG 117

Query: 252 IISNEAPAYSVVMEYLLPITIPLLLFKADLGRVVQSTGKMLLAFLLGS-----GHILASI 88
           II  +APAYS+VME+LLPIT+PLLLF+AD+ +V+QSTG +LLAFLLGS     G ++A +
Sbjct: 118 IIPYDAPAYSIVMEFLLPITLPLLLFRADMRQVMQSTGTLLLAFLLGSVATIAGTLVAFL 177

Query: 87  LCPFSSLSVD 58
           + P  SL  D
Sbjct: 178 VVPMRSLGQD 187


>ref|XP_002272875.1| PREDICTED: uncharacterized membrane protein yjcL [Vitis vinifera]
          Length = 494

 Score =  159 bits (401), Expect = 3e-37
 Identities = 79/130 (60%), Positives = 104/130 (80%), Gaps = 5/130 (3%)
 Frame = -2

Query: 432 VKVKAQLNFPLIPPQDHWGTFSVLFATAAFGIWSDTTKVGCTVSGAVVSTLGGLAASNLG 253
           VKV++QL+ P+I P+DHWGT++ LFAT AFG+WS+ TK+G  VS A+VS L G+AASNLG
Sbjct: 110 VKVRSQLSGPIISPEDHWGTWTALFATGAFGLWSEKTKIGSMVSAALVSILVGMAASNLG 169

Query: 252 IISNEAPAYSVVMEYLLPITIPLLLFKADLGRVVQSTGKMLLAFLLGS-----GHILASI 88
           II  +APAYS+VME+LLPIT+PLLLF+AD+ +V+QSTG +LLAFLLGS     G ++A +
Sbjct: 170 IIPYDAPAYSIVMEFLLPITLPLLLFRADMRQVMQSTGTLLLAFLLGSVATIAGTLVAFL 229

Query: 87  LCPFSSLSVD 58
           + P  SL  D
Sbjct: 230 VVPMRSLGQD 239


>ref|XP_002513660.1| conserved hypothetical protein [Ricinus communis]
           gi|223547568|gb|EEF49063.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 965

 Score =  157 bits (397), Expect = 8e-37
 Identities = 79/130 (60%), Positives = 100/130 (76%), Gaps = 5/130 (3%)
 Frame = -2

Query: 432 VKVKAQLNFPLIPPQDHWGTFSVLFATAAFGIWSDTTKVGCTVSGAVVSTLGGLAASNLG 253
           +K+++QL FPLI P DHWGT++ LFAT AFGIWS+ TKVG  VS A+VSTL GLAASN+G
Sbjct: 581 IKLRSQLRFPLISPDDHWGTWTALFATGAFGIWSEGTKVGSMVSAALVSTLVGLAASNIG 640

Query: 252 IISNEAPAYSVVMEYLLPITIPLLLFKADLGRVVQSTGKMLLAFLLGS-----GHILASI 88
           II  E  AYS+V+E+LLP+T+PLLLF+ADL  V++STGK+ LAFLLGS     G  +A +
Sbjct: 641 IIPYETAAYSLVLEFLLPLTVPLLLFRADLRNVIRSTGKLFLAFLLGSVATIIGTTVAFL 700

Query: 87  LCPFSSLSVD 58
           + P  SL  D
Sbjct: 701 MVPMRSLGPD 710



 Score =  154 bits (389), Expect = 7e-36
 Identities = 78/128 (60%), Positives = 99/128 (77%), Gaps = 5/128 (3%)
 Frame = -2

Query: 426 VKAQLNFPLIPPQDHWGTFSVLFATAAFGIWSDTTKVGCTVSGAVVSTLGGLAASNLGII 247
           V++ LNFPLI   D WGT++ LFAT AFGIWS+ TK+G  +SGA+VSTL GLA SNLGII
Sbjct: 80  VRSNLNFPLISSNDRWGTWTALFATGAFGIWSEKTKIGSALSGALVSTLVGLAGSNLGII 139

Query: 246 SNEAPAYSVVMEYLLPITIPLLLFKADLGRVVQSTGKMLLAFLLGS-----GHILASILC 82
           S E+PAY+VV+E+LLP+ +PLLLF+ADL RV++STG +LLAFLLGS     G ++A  + 
Sbjct: 140 SCESPAYAVVLEFLLPLAVPLLLFRADLRRVIRSTGTLLLAFLLGSVATTVGTVVAYWIV 199

Query: 81  PFSSLSVD 58
           P  SL  D
Sbjct: 200 PMRSLGQD 207


>emb|CAN74772.1| hypothetical protein VITISV_024875 [Vitis vinifera]
          Length = 1230

 Score =  157 bits (396), Expect = 1e-36
 Identities = 79/130 (60%), Positives = 102/130 (78%), Gaps = 5/130 (3%)
 Frame = -2

Query: 432 VKVKAQLNFPLIPPQDHWGTFSVLFATAAFGIWSDTTKVGCTVSGAVVSTLGGLAASNLG 253
           VKV++QL+ P I P DHWGT++ LFAT AFG+WS+ TK+G  VS A+VS L G+AASNLG
Sbjct: 110 VKVRSQLSGPFISPDDHWGTWTALFATGAFGLWSEKTKIGSMVSAALVSILVGMAASNLG 169

Query: 252 IISNEAPAYSVVMEYLLPITIPLLLFKADLGRVVQSTGKMLLAFLLGS-----GHILASI 88
           II  +APAYS+VME+LLPIT+PLLLF+AD+ +V+QSTG +LLAFLLGS     G ++A +
Sbjct: 170 IIPYDAPAYSIVMEFLLPITLPLLLFRADMRQVMQSTGTLLLAFLLGSVATIAGTLVAFL 229

Query: 87  LCPFSSLSVD 58
           + P  SL  D
Sbjct: 230 VVPMRSLGHD 239


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