BLASTX nr result

ID: Coptis23_contig00036546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036546
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004151417.1| PREDICTED: glutamate decarboxylase 1-like [C...   187   1e-45
ref|XP_003519319.1| PREDICTED: glutamate decarboxylase 1-like [G...   186   2e-45
ref|XP_002528515.1| glutamate decarboxylase, putative [Ricinus c...   186   2e-45
ref|XP_002305927.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
gb|ABA18652.1| glutamate decarboxylase [Populus tremula x Populu...   186   2e-45

>ref|XP_004151417.1| PREDICTED: glutamate decarboxylase 1-like [Cucumis sativus]
           gi|449521780|ref|XP_004167907.1| PREDICTED: glutamate
           decarboxylase 1-like [Cucumis sativus]
          Length = 404

 Score =  187 bits (474), Expect = 1e-45
 Identities = 88/93 (94%), Positives = 91/93 (97%)
 Frame = -2

Query: 279 EMVDENTICVAAILGSTLNGEFEDVKLLNDLLAQKNKITGWETPIHVDAASGGFIAPFIY 100
           EMVDENTICVAAILGSTLNGEFEDVKLLNDLL +KNK TGW+TPIHVDAASGGFIAPFIY
Sbjct: 102 EMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFIY 161

Query: 99  PELEWDFRLPLVKSINVSGHKYGLVYAGVGWVI 1
           PELEWDFRLPLVKSINVSGHKYGLVYAG+GWVI
Sbjct: 162 PELEWDFRLPLVKSINVSGHKYGLVYAGIGWVI 194


>ref|XP_003519319.1| PREDICTED: glutamate decarboxylase 1-like [Glycine max]
          Length = 503

 Score =  186 bits (472), Expect = 2e-45
 Identities = 87/93 (93%), Positives = 91/93 (97%)
 Frame = -2

Query: 279 EMVDENTICVAAILGSTLNGEFEDVKLLNDLLAQKNKITGWETPIHVDAASGGFIAPFIY 100
           EMVDENTICVAAILGSTLNGEFEDVKLLNDLL +KNK TGW+TPIHVDAASGGFIAPF+Y
Sbjct: 197 EMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLY 256

Query: 99  PELEWDFRLPLVKSINVSGHKYGLVYAGVGWVI 1
           PELEWDFRLPLVKSINVSGHKYGLVYAG+GWVI
Sbjct: 257 PELEWDFRLPLVKSINVSGHKYGLVYAGIGWVI 289


>ref|XP_002528515.1| glutamate decarboxylase, putative [Ricinus communis]
           gi|223532075|gb|EEF33884.1| glutamate decarboxylase,
           putative [Ricinus communis]
          Length = 498

 Score =  186 bits (472), Expect = 2e-45
 Identities = 87/93 (93%), Positives = 91/93 (97%)
 Frame = -2

Query: 279 EMVDENTICVAAILGSTLNGEFEDVKLLNDLLAQKNKITGWETPIHVDAASGGFIAPFIY 100
           EMVDENTICVAAILGSTLNGEFEDVKLLNDLL +KNK TGW+TPIHVDAASGGFIAPF+Y
Sbjct: 197 EMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKQTGWDTPIHVDAASGGFIAPFLY 256

Query: 99  PELEWDFRLPLVKSINVSGHKYGLVYAGVGWVI 1
           PELEWDFRLPLVKSINVSGHKYGLVYAG+GWVI
Sbjct: 257 PELEWDFRLPLVKSINVSGHKYGLVYAGIGWVI 289


>ref|XP_002305927.1| predicted protein [Populus trichocarpa] gi|222848891|gb|EEE86438.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score =  186 bits (472), Expect = 2e-45
 Identities = 87/93 (93%), Positives = 91/93 (97%)
 Frame = -2

Query: 279 EMVDENTICVAAILGSTLNGEFEDVKLLNDLLAQKNKITGWETPIHVDAASGGFIAPFIY 100
           +MVDENTICVAAILGSTLNGEFEDVKLLNDLL +KNK TGW+TPIHVDAASGGFIAPFIY
Sbjct: 197 QMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKSTGWDTPIHVDAASGGFIAPFIY 256

Query: 99  PELEWDFRLPLVKSINVSGHKYGLVYAGVGWVI 1
           PELEWDFRLPLVKSINVSGHKYGLVYAG+GWVI
Sbjct: 257 PELEWDFRLPLVKSINVSGHKYGLVYAGIGWVI 289


>gb|ABA18652.1| glutamate decarboxylase [Populus tremula x Populus alba]
          Length = 499

 Score =  186 bits (472), Expect = 2e-45
 Identities = 87/93 (93%), Positives = 91/93 (97%)
 Frame = -2

Query: 279 EMVDENTICVAAILGSTLNGEFEDVKLLNDLLAQKNKITGWETPIHVDAASGGFIAPFIY 100
           +MVDENTICVAAILGSTLNGEFEDVKLLNDLL +KNK TGW+TPIHVDAASGGFIAPFIY
Sbjct: 197 QMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKSTGWDTPIHVDAASGGFIAPFIY 256

Query: 99  PELEWDFRLPLVKSINVSGHKYGLVYAGVGWVI 1
           PELEWDFRLPLVKSINVSGHKYGLVYAG+GWVI
Sbjct: 257 PELEWDFRLPLVKSINVSGHKYGLVYAGIGWVI 289


Top