BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036536
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFF18834.1| ribonucleotide reductase small subunit, partial [...   204   8e-51
ref|XP_002279943.1| PREDICTED: ribonucleoside-diphosphate reduct...   199   1e-49
ref|XP_002311826.1| predicted protein [Populus trichocarpa] gi|2...   196   2e-48
ref|XP_002516790.1| ribonucleoside-diphosphate reductase small c...   195   3e-48
ref|NP_001237733.1| ribonucleotide reductase small subunit [Glyc...   194   5e-48

>gb|AFF18834.1| ribonucleotide reductase small subunit, partial [Dimocarpus longan]
          Length = 180

 Score =  204 bits (518), Expect = 8e-51
 Identities = 96/104 (92%), Positives = 102/104 (98%)
 Frame = +2

Query: 26  PILMENSQRFCMFPIRYKQLWEMYKKAQASFWTAEEVDLSQDVQQWEKLTDSEKHFISHV 205
           PILME +QRFCMFPIRYKQLWEMYKKAQASFWTAEEVDLSQDVQQWE+L+DSEKHFI+HV
Sbjct: 19  PILMEQNQRFCMFPIRYKQLWEMYKKAQASFWTAEEVDLSQDVQQWERLSDSEKHFITHV 78

Query: 206 LAFFAASDGIVLENLAARFLKDVQVPEARAFYGFQIAMENIHSE 337
           LAFFAASDGIVLENLAARFL D+Q+PEARAFYGFQIAMENIHSE
Sbjct: 79  LAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSE 122


>ref|XP_002279943.1| PREDICTED: ribonucleoside-diphosphate reductase small chain A
           [Vitis vinifera]
          Length = 340

 Score =  199 bits (507), Expect = 1e-49
 Identities = 94/104 (90%), Positives = 101/104 (97%)
 Frame = +2

Query: 26  PILMENSQRFCMFPIRYKQLWEMYKKAQASFWTAEEVDLSQDVQQWEKLTDSEKHFISHV 205
           PILM+NSQRFCMFPIRY+QLWEMYKKA+ASFWTAEEVDLS DVQQWE L++SEKHFISHV
Sbjct: 20  PILMKNSQRFCMFPIRYRQLWEMYKKAEASFWTAEEVDLSHDVQQWESLSNSEKHFISHV 79

Query: 206 LAFFAASDGIVLENLAARFLKDVQVPEARAFYGFQIAMENIHSE 337
           LAFFAASDGIVLENLAARFL D+Q+PEARAFYGFQIAMENIHSE
Sbjct: 80  LAFFAASDGIVLENLAARFLHDIQIPEARAFYGFQIAMENIHSE 123


>ref|XP_002311826.1| predicted protein [Populus trichocarpa] gi|222851646|gb|EEE89193.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  196 bits (498), Expect = 2e-48
 Identities = 93/104 (89%), Positives = 100/104 (96%)
 Frame = +2

Query: 26  PILMENSQRFCMFPIRYKQLWEMYKKAQASFWTAEEVDLSQDVQQWEKLTDSEKHFISHV 205
           PIL E +QRFCMFPIRYK+LWEMYKKA+ASFWTAEEVDLS+D+QQWE L+DSEKHFISHV
Sbjct: 21  PILKEQNQRFCMFPIRYKELWEMYKKAEASFWTAEEVDLSRDMQQWEALSDSEKHFISHV 80

Query: 206 LAFFAASDGIVLENLAARFLKDVQVPEARAFYGFQIAMENIHSE 337
           LAFFAASDGIVLENLAARFL DVQ+PEARAFYGFQIAMENIHSE
Sbjct: 81  LAFFAASDGIVLENLAARFLYDVQIPEARAFYGFQIAMENIHSE 124


>ref|XP_002516790.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis] gi|223543878|gb|EEF45404.1|
           ribonucleoside-diphosphate reductase small chain,
           putative [Ricinus communis]
          Length = 342

 Score =  195 bits (496), Expect = 3e-48
 Identities = 94/104 (90%), Positives = 98/104 (94%)
 Frame = +2

Query: 26  PILMENSQRFCMFPIRYKQLWEMYKKAQASFWTAEEVDLSQDVQQWEKLTDSEKHFISHV 205
           PIL E +QRFCMFPIRYK LWEMYKKA+ASFWTAEEVDLSQDVQQWE L+ SEKHFISHV
Sbjct: 21  PILKEQNQRFCMFPIRYKSLWEMYKKAEASFWTAEEVDLSQDVQQWETLSVSEKHFISHV 80

Query: 206 LAFFAASDGIVLENLAARFLKDVQVPEARAFYGFQIAMENIHSE 337
           LAFFAASDGIVLENLAARFL D+QVPEARAFYGFQIAMENIHSE
Sbjct: 81  LAFFAASDGIVLENLAARFLNDIQVPEARAFYGFQIAMENIHSE 124


>ref|NP_001237733.1| ribonucleotide reductase small subunit [Glycine max]
           gi|4894211|gb|AAD32302.1| ribonucleotide reductase small
           subunit [Glycine max]
          Length = 339

 Score =  194 bits (494), Expect = 5e-48
 Identities = 93/104 (89%), Positives = 98/104 (94%)
 Frame = +2

Query: 26  PILMENSQRFCMFPIRYKQLWEMYKKAQASFWTAEEVDLSQDVQQWEKLTDSEKHFISHV 205
           PILME SQRFCMFPIRYKQ+WEMYKKA+ASFWTAEEVDLS DVQ WE L+ SEKHFI+HV
Sbjct: 18  PILMEQSQRFCMFPIRYKQIWEMYKKAEASFWTAEEVDLSYDVQHWETLSVSEKHFITHV 77

Query: 206 LAFFAASDGIVLENLAARFLKDVQVPEARAFYGFQIAMENIHSE 337
           LAFFAASDGIVLENLAARFL DVQ+PEARAFYGFQIAMENIHSE
Sbjct: 78  LAFFAASDGIVLENLAARFLSDVQIPEARAFYGFQIAMENIHSE 121