BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036504
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containi...    57   1e-06
ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containi...    57   1e-06
ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containi...    57   1e-06
ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containi...    57   1e-06
ref|XP_003605422.1| Pentatricopeptide repeat-containing protein ...    57   1e-06

>ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 22/29 (75%), Positives = 28/29 (96%)
 Frame = -1

Query: 291 VSSKREIVVRDTNRFHHIKDGLCSCNDYW 205
           +++ REIVVRD+NRFHHIK+G+CSCNDYW
Sbjct: 781 MATGREIVVRDSNRFHHIKNGVCSCNDYW 809


>ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 22/29 (75%), Positives = 28/29 (96%)
 Frame = -1

Query: 291 VSSKREIVVRDTNRFHHIKDGLCSCNDYW 205
           +++ REIVVRD+NRFHHIK+G+CSCNDYW
Sbjct: 601 MATGREIVVRDSNRFHHIKNGVCSCNDYW 629


>ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 22/25 (88%), Positives = 23/25 (92%)
 Frame = -1

Query: 279 REIVVRDTNRFHHIKDGLCSCNDYW 205
           REI+VRD NRFHH KDGLCSCNDYW
Sbjct: 721 REIIVRDRNRFHHFKDGLCSCNDYW 745


>ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 23/25 (92%), Positives = 23/25 (92%)
 Frame = -1

Query: 279 REIVVRDTNRFHHIKDGLCSCNDYW 205
           REIVVRD NRFHHIKDG CSCNDYW
Sbjct: 796 REIVVRDANRFHHIKDGKCSCNDYW 820


>ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355506477|gb|AES87619.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 839

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 23/27 (85%), Positives = 24/27 (88%)
 Frame = -1

Query: 285 SKREIVVRDTNRFHHIKDGLCSCNDYW 205
           S REIVVRD NRFHH+KDG CSCNDYW
Sbjct: 813 SGREIVVRDANRFHHMKDGTCSCNDYW 839