BLASTX nr result

ID: Coptis23_contig00036496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036496
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38016.1| unknown [Lotus japonicus]                              154   9e-36
gb|ABK21756.1| unknown [Picea sitchensis] gi|116781549|gb|ABK221...   153   1e-35
ref|NP_175413.1| cell cycle arrest protein BUB3 [Arabidopsis tha...   152   2e-35
ref|XP_002891542.1| hypothetical protein ARALYDRAFT_474121 [Arab...   152   2e-35
ref|XP_003536585.1| PREDICTED: mitotic checkpoint protein BUB3-l...   152   3e-35

>gb|AFK38016.1| unknown [Lotus japonicus]
          Length = 167

 Score =  154 bits (388), Expect = 9e-36
 Identities = 74/91 (81%), Positives = 83/91 (91%), Gaps = 1/91 (1%)
 Frame = +3

Query: 3   VNTMAFHPIYGTFASGGCDGYVNVWDGNNKKRLYQYSKYPTSIAALAFSRDGCMLAVASS 182
           VN MAFHPIYGTFA+GGCDGYVNVWDGNNKKRLYQYSKYPTSIAAL+FSRDG +LAVASS
Sbjct: 71  VNAMAFHPIYGTFATGGCDGYVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASS 130

Query: 183 YTYEEGKKHYETDSIFVRDVSD-EVKPKLKV 272
           YT+EEG K +E D+I+VR V++ EVKPK KV
Sbjct: 131 YTFEEGPKPHEKDAIYVRSVNEIEVKPKPKV 161


>gb|ABK21756.1| unknown [Picea sitchensis] gi|116781549|gb|ABK22148.1| unknown
           [Picea sitchensis]
          Length = 342

 Score =  153 bits (387), Expect = 1e-35
 Identities = 74/91 (81%), Positives = 83/91 (91%), Gaps = 1/91 (1%)
 Frame = +3

Query: 3   VNTMAFHPIYGTFASGGCDGYVNVWDGNNKKRLYQYSKYPTSIAALAFSRDGCMLAVASS 182
           VN +AFHPIYGTFA+GGCDGYVNVWDGNNKKRLYQYSKYPTSIAAL+FSRDG +LAVASS
Sbjct: 247 VNAIAFHPIYGTFATGGCDGYVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASS 306

Query: 183 YTYEEGKKHYETDSIFVRDVSD-EVKPKLKV 272
           YT+EEG K +E D+IFVR V++ EVKPK KV
Sbjct: 307 YTFEEGDKPHEPDAIFVRSVNEAEVKPKPKV 337


>ref|NP_175413.1| cell cycle arrest protein BUB3 [Arabidopsis thaliana]
           gi|12597855|gb|AAG60165.1|AC074110_3 mitotic checkpoint
           protein, putative [Arabidopsis thaliana]
           gi|332194369|gb|AEE32490.1| cell cycle arrest protein
           BUB3 [Arabidopsis thaliana]
          Length = 339

 Score =  152 bits (385), Expect = 2e-35
 Identities = 73/91 (80%), Positives = 83/91 (91%), Gaps = 1/91 (1%)
 Frame = +3

Query: 3   VNTMAFHPIYGTFASGGCDGYVNVWDGNNKKRLYQYSKYPTSIAALAFSRDGCMLAVASS 182
           VN +AFHPIYGTFASGGCDG+VN+WDGNNKKRLYQYSKYPTSIAAL+FSRDG +LAVASS
Sbjct: 243 VNAIAFHPIYGTFASGGCDGFVNIWDGNNKKRLYQYSKYPTSIAALSFSRDGGLLAVASS 302

Query: 183 YTYEEGKKHYETDSIFVRDVSD-EVKPKLKV 272
           YT+EEG K +E D+IFVR V++ EVKPK KV
Sbjct: 303 YTFEEGDKPHEPDAIFVRSVNEIEVKPKPKV 333


>ref|XP_002891542.1| hypothetical protein ARALYDRAFT_474121 [Arabidopsis lyrata subsp.
           lyrata] gi|297337384|gb|EFH67801.1| hypothetical protein
           ARALYDRAFT_474121 [Arabidopsis lyrata subsp. lyrata]
          Length = 339

 Score =  152 bits (385), Expect = 2e-35
 Identities = 73/91 (80%), Positives = 83/91 (91%), Gaps = 1/91 (1%)
 Frame = +3

Query: 3   VNTMAFHPIYGTFASGGCDGYVNVWDGNNKKRLYQYSKYPTSIAALAFSRDGCMLAVASS 182
           VN +AFHPIYGTFASGGCDG+VN+WDGNNKKRLYQYSKYPTSIAAL+FSRDG +LAVASS
Sbjct: 243 VNAIAFHPIYGTFASGGCDGFVNIWDGNNKKRLYQYSKYPTSIAALSFSRDGGLLAVASS 302

Query: 183 YTYEEGKKHYETDSIFVRDVSD-EVKPKLKV 272
           YT+EEG K +E D+IFVR V++ EVKPK KV
Sbjct: 303 YTFEEGDKPHEPDAIFVRSVNEIEVKPKPKV 333


>ref|XP_003536585.1| PREDICTED: mitotic checkpoint protein BUB3-like [Glycine max]
          Length = 340

 Score =  152 bits (384), Expect = 3e-35
 Identities = 73/91 (80%), Positives = 82/91 (90%), Gaps = 1/91 (1%)
 Frame = +3

Query: 3   VNTMAFHPIYGTFASGGCDGYVNVWDGNNKKRLYQYSKYPTSIAALAFSRDGCMLAVASS 182
           VN +AFHPIYGTFA+GGCDGYVNVWDGNNKKRLYQYSKYPTS+AAL+FSRDG +LAVASS
Sbjct: 244 VNAIAFHPIYGTFATGGCDGYVNVWDGNNKKRLYQYSKYPTSVAALSFSRDGRLLAVASS 303

Query: 183 YTYEEGKKHYETDSIFVRDVSD-EVKPKLKV 272
           YT+EEG K  E D+IFVR V++ EVKPK KV
Sbjct: 304 YTFEEGPKSQEQDAIFVRSVNEIEVKPKPKV 334


Top