BLASTX nr result

ID: Coptis23_contig00036459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036459
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||E85079 hypothetical protein AT4g08070 [imported] - Arabidop...   109   3e-22
gb|AAD38214.1|AF147265_1 similar to Arabidopsis thaliana putativ...   108   5e-22
gb|AAD03356.1| En/Spm-like transposon protein [Arabidopsis thali...   105   3e-21
ref|XP_003634736.1| PREDICTED: uncharacterized protein LOC100853...   105   4e-21
ref|XP_003634239.1| PREDICTED: uncharacterized protein LOC100854...   105   4e-21

>pir||E85079 hypothetical protein AT4g08070 [imported] - Arabidopsis thaliana
           gi|5724773|gb|AAD48077.1|AF160183_4 contains similarity
           to Antirrhinum majus hypothetical protein TNP2
           (GB:X57297); may be a pseudogene [Arabidopsis thaliana]
           gi|7267447|emb|CAB81144.1| AT4g08070 [Arabidopsis
           thaliana]
          Length = 767

 Score =  109 bits (272), Expect = 3e-22
 Identities = 51/96 (53%), Positives = 68/96 (70%)
 Frame = +3

Query: 72  DDQTNDEFKNYMENVESPLYLGCTTYTRLSATMVLYKLKAISGWSNKSFNRLLDILCEML 251
           DD+  DEF   + + E+PLY  C  +++LSA + L++LK  +GWS+KSFN LL+ L EML
Sbjct: 139 DDKKEDEFLAKLADAETPLYPSCVNHSKLSAIVSLFRLKTKNGWSDKSFNDLLETLSEML 198

Query: 252 PNNNTLPDSLYSVKRLLKEFDLEERKIHACVNDCVL 359
           P +N L  SLY VK+ LK FD+  +KIHACVNDC L
Sbjct: 199 PEDNVLHTSLYEVKKFLKSFDMGYQKIHACVNDCCL 234


>gb|AAD38214.1|AF147265_1 similar to Arabidopsis thaliana putative En/Spm transposon protein
           (GB:AC005396) [Arabidopsis thaliana]
           gi|7267373|emb|CAB77934.1| putative transposon protein
           [Arabidopsis thaliana]
          Length = 569

 Score =  108 bits (270), Expect = 5e-22
 Identities = 51/96 (53%), Positives = 68/96 (70%)
 Frame = +3

Query: 72  DDQTNDEFKNYMENVESPLYLGCTTYTRLSATMVLYKLKAISGWSNKSFNRLLDILCEML 251
           DD+  DEF   + + E+PLY  C  +++LSA + L++L   +GWS+KSFN LL+IL EML
Sbjct: 59  DDKKEDEFLAKLADAETPLYPSCVNHSKLSAIVSLFRLNTKNGWSDKSFNDLLEILPEML 118

Query: 252 PNNNTLPDSLYSVKRLLKEFDLEERKIHACVNDCVL 359
           P +N L  SLY VK+ LK FD+  +KIHACVNDC L
Sbjct: 119 PKDNVLHTSLYKVKKFLKSFDMGYQKIHACVNDCCL 154


>gb|AAD03356.1| En/Spm-like transposon protein [Arabidopsis thaliana]
          Length = 665

 Score =  105 bits (263), Expect = 3e-21
 Identities = 50/96 (52%), Positives = 67/96 (69%)
 Frame = +3

Query: 72  DDQTNDEFKNYMENVESPLYLGCTTYTRLSATMVLYKLKAISGWSNKSFNRLLDILCEML 251
           DD+  DE    + + E+PLY  C  +++LSA + L++LK  +GWS+KSFN LL+ L EML
Sbjct: 11  DDKKEDELLAKLVDAETPLYPSCVNHSKLSAIVSLFRLKTKNGWSDKSFNDLLETLPEML 70

Query: 252 PNNNTLPDSLYSVKRLLKEFDLEERKIHACVNDCVL 359
           P +N L  SLY VK+ LK FD+  +KIHACVNDC L
Sbjct: 71  PEDNVLHTSLYEVKKFLKSFDMGYQKIHACVNDCCL 106


>ref|XP_003634736.1| PREDICTED: uncharacterized protein LOC100853259 [Vitis vinifera]
          Length = 1012

 Score =  105 bits (262), Expect = 4e-21
 Identities = 53/105 (50%), Positives = 68/105 (64%), Gaps = 2/105 (1%)
 Frame = +3

Query: 51  ERKSVIDDDQTNDE--FKNYMENVESPLYLGCTTYTRLSATMVLYKLKAISGWSNKSFNR 224
           E   V  DD+ ND   F+  +E+ + PLY GC  +T+LSA + LY LKA  GWS+KSF+ 
Sbjct: 147 ETVQVAYDDRKNDPKLFETLLEDAQKPLYPGCRNFTKLSALVKLYNLKARYGWSDKSFSE 206

Query: 225 LLDILCEMLPNNNTLPDSLYSVKRLLKEFDLEERKIHACVNDCVL 359
           LL IL +MLP NN LP S+Y  K+ L    +E  KIHAC NDC+L
Sbjct: 207 LLSILGDMLPLNNELPLSMYEAKKTLNTLGMEYEKIHACPNDCIL 251


>ref|XP_003634239.1| PREDICTED: uncharacterized protein LOC100854961 [Vitis vinifera]
          Length = 982

 Score =  105 bits (262), Expect = 4e-21
 Identities = 52/101 (51%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
 Frame = +3

Query: 63  VIDDDQTND--EFKNYMENVESPLYLGCTTYTRLSATMVLYKLKAISGWSNKSFNRLLDI 236
           VIDD+   D   FK  +E+ E PLY GC  +T+LSA + LY +KA  GWS+KSF+ LL I
Sbjct: 15  VIDDEFMTDPMSFKKLLEDAEKPLYPGCIKFTKLSALVKLYNVKARYGWSDKSFSDLLQI 74

Query: 237 LCEMLPNNNTLPDSLYSVKRLLKEFDLEERKIHACVNDCVL 359
           L +MLP NN +P S+Y  K+ L    +E +KIHAC NDC+L
Sbjct: 75  LGDMLPVNNEMPLSMYEAKKALNALGMEYKKIHACPNDCIL 115


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