BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036438
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002871281.1| structural maintenance of chromosomes family...    89   5e-16
ref|XP_002278113.1| PREDICTED: structural maintenance of chromos...    84   1e-14
ref|XP_004166709.1| PREDICTED: LOW QUALITY PROTEIN: structural m...    83   2e-14
ref|XP_004146918.1| PREDICTED: structural maintenance of chromos...    83   2e-14
ref|NP_196383.1| structural maintenance of chromosomes 6A [Arabi...    83   2e-14

>ref|XP_002871281.1| structural maintenance of chromosomes family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297317118|gb|EFH47540.1|
           structural maintenance of chromosomes family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1063

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 43/59 (72%), Positives = 47/59 (79%)
 Frame = +3

Query: 240 HKMEDHLPKLPPRPLSGIITKIRLENFMCHSSLEIEFGEWVNFITGQNGSGKSAILTAL 416
           H  +   P    RP SG I +IRLENFMCHS+LEIEFG+WVNFITGQNGSGKSAILTAL
Sbjct: 4   HGNQQSNPFNDQRPSSGTIVRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTAL 62


>ref|XP_002278113.1| PREDICTED: structural maintenance of chromosomes protein 6-like
           [Vitis vinifera]
          Length = 1057

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 39/47 (82%), Positives = 43/47 (91%)
 Frame = +3

Query: 276 RPLSGIITKIRLENFMCHSSLEIEFGEWVNFITGQNGSGKSAILTAL 416
           R  +GII KIRLENFMCHSSL+IE GEW+NF+TGQNGSGKSAILTAL
Sbjct: 16  RSSAGIILKIRLENFMCHSSLQIELGEWLNFVTGQNGSGKSAILTAL 62


>ref|XP_004166709.1| PREDICTED: LOW QUALITY PROTEIN: structural maintenance of
           chromosomes protein 6-like, partial [Cucumis sativus]
          Length = 969

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 39/50 (78%), Positives = 44/50 (88%)
 Frame = +3

Query: 267 LPPRPLSGIITKIRLENFMCHSSLEIEFGEWVNFITGQNGSGKSAILTAL 416
           LP R  +GI+  IRLENFMCHS+L I+FGEW+NFITGQNGSGKSAILTAL
Sbjct: 7   LPHRSGAGIVKSIRLENFMCHSNLYIQFGEWLNFITGQNGSGKSAILTAL 56


>ref|XP_004146918.1| PREDICTED: structural maintenance of chromosomes protein 6-like
           [Cucumis sativus]
          Length = 1052

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 39/50 (78%), Positives = 44/50 (88%)
 Frame = +3

Query: 267 LPPRPLSGIITKIRLENFMCHSSLEIEFGEWVNFITGQNGSGKSAILTAL 416
           LP R  +GI+  IRLENFMCHS+L I+FGEW+NFITGQNGSGKSAILTAL
Sbjct: 7   LPHRSGAGIVKSIRLENFMCHSNLYIQFGEWLNFITGQNGSGKSAILTAL 56


>ref|NP_196383.1| structural maintenance of chromosomes 6A [Arabidopsis thaliana]
           gi|9759587|dbj|BAB11444.1| SMC-like protein [Arabidopsis
           thaliana] gi|332003807|gb|AED91190.1| structural
           maintenance of chromosomes 6A [Arabidopsis thaliana]
          Length = 1058

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 39/44 (88%), Positives = 42/44 (95%)
 Frame = +3

Query: 285 SGIITKIRLENFMCHSSLEIEFGEWVNFITGQNGSGKSAILTAL 416
           SG I +IRLENFMCHS+LEIEFG+WVNFITGQNGSGKSAILTAL
Sbjct: 20  SGKILRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTAL 63