BLASTX nr result

ID: Coptis23_contig00036434 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036434
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597910.1| SNF4b [Medicago truncatula] gi|355486958|gb|...   134   1e-29
gb|AAO61675.1| SNF4b [Medicago truncatula]                            134   1e-29
ref|XP_002517647.1| AMP-activated protein kinase, gamma regulato...   133   1e-29
ref|XP_004152338.1| PREDICTED: SNF1-related protein kinase regul...   128   6e-28
ref|NP_172985.1| Cystathionine beta-synthase (CBS) protein [Arab...   127   1e-27

>ref|XP_003597910.1| SNF4b [Medicago truncatula] gi|355486958|gb|AES68161.1| SNF4b
           [Medicago truncatula]
          Length = 394

 Score =  134 bits (336), Expect = 1e-29
 Identities = 68/91 (74%), Positives = 74/91 (81%), Gaps = 8/91 (8%)
 Frame = -2

Query: 294 GHWIGAGGSMILESDKQTGAVRKHYIGMVTMFDILAHLADDDHGYG------DLDERMSV 133
           G WIGAGGSMI+ESDKQTGAVRKHYIGMVTM DI+AH+A DDH  G      DLD+RMSV
Sbjct: 65  GQWIGAGGSMIVESDKQTGAVRKHYIGMVTMLDIVAHIAGDDHLSGGDDVEEDLDQRMSV 124

Query: 132 PVSSVIGHSLEGLSLWTLNPNTRI--CFVVL 46
           PVSS+IGHS EGLSLWTLNPNT +  C  VL
Sbjct: 125 PVSSIIGHSFEGLSLWTLNPNTSLLDCMEVL 155


>gb|AAO61675.1| SNF4b [Medicago truncatula]
          Length = 382

 Score =  134 bits (336), Expect = 1e-29
 Identities = 68/91 (74%), Positives = 74/91 (81%), Gaps = 8/91 (8%)
 Frame = -2

Query: 294 GHWIGAGGSMILESDKQTGAVRKHYIGMVTMFDILAHLADDDHGYG------DLDERMSV 133
           G WIGAGGSMI+ESDKQTGAVRKHYIGMVTM DI+AH+A DDH  G      DLD+RMSV
Sbjct: 65  GQWIGAGGSMIVESDKQTGAVRKHYIGMVTMLDIVAHIAGDDHLSGGDDVEEDLDQRMSV 124

Query: 132 PVSSVIGHSLEGLSLWTLNPNTRI--CFVVL 46
           PVSS+IGHS EGLSLWTLNPNT +  C  VL
Sbjct: 125 PVSSIIGHSFEGLSLWTLNPNTSLLDCMEVL 155


>ref|XP_002517647.1| AMP-activated protein kinase, gamma regulatory subunit, putative
           [Ricinus communis] gi|223543279|gb|EEF44811.1|
           AMP-activated protein kinase, gamma regulatory subunit,
           putative [Ricinus communis]
          Length = 403

 Score =  133 bits (335), Expect = 1e-29
 Identities = 66/84 (78%), Positives = 70/84 (83%), Gaps = 6/84 (7%)
 Frame = -2

Query: 294 GHWIGAGGSMILESDKQTGAVRKHYIGMVTMFDILAHLADDDHGYG------DLDERMSV 133
           GHWIGAGGSMI+ESDKQTGAVRKHYIGMVTM DILAH+A DD   G      DLD +MSV
Sbjct: 90  GHWIGAGGSMIMESDKQTGAVRKHYIGMVTMLDILAHIAGDDQMNGGDDDASDLDRKMSV 149

Query: 132 PVSSVIGHSLEGLSLWTLNPNTRI 61
           PVSS+IGH LEGLSLWTLNPNT I
Sbjct: 150 PVSSIIGHCLEGLSLWTLNPNTSI 173


>ref|XP_004152338.1| PREDICTED: SNF1-related protein kinase regulatory subunit
           gamma-like PV42a-like [Cucumis sativus]
           gi|449525654|ref|XP_004169831.1| PREDICTED: SNF1-related
           protein kinase regulatory subunit gamma-like PV42a-like
           [Cucumis sativus]
          Length = 373

 Score =  128 bits (321), Expect = 6e-28
 Identities = 62/85 (72%), Positives = 72/85 (84%), Gaps = 7/85 (8%)
 Frame = -2

Query: 294 GHWIGAGGSMILESDKQTGAVRKHYIGMVTMFDILAHLADDDH-GYG------DLDERMS 136
           GHWIGAGGSMI+ESDK+TG +RKHYIGMVTM DILAH+A DDH G G      DLD +M+
Sbjct: 60  GHWIGAGGSMIMESDKRTGVLRKHYIGMVTMLDILAHIAGDDHDGDGGRDDLIDLDRKMA 119

Query: 135 VPVSSVIGHSLEGLSLWTLNPNTRI 61
           VPVS++IGH++EGLSLWTLNPNT I
Sbjct: 120 VPVSNIIGHNVEGLSLWTLNPNTSI 144


>ref|NP_172985.1| Cystathionine beta-synthase (CBS) protein [Arabidopsis thaliana]
           gi|75315303|sp|Q9XI37.1|PV42A_ARATH RecName:
           Full=SNF1-related protein kinase regulatory subunit
           gamma-like PV42a; Short=AtPV42a; AltName: Full=AKIN
           subunit gamma-like PV42a; AltName: Full=CBS
           domain-containing protein CBSCBS4
           gi|5103830|gb|AAD39660.1|AC007591_25 Similar to
           gb|U40713 Pv42p gene from Phaseolus vulgaris and
           contains PF|00571 CBS (cystathionine beta synthase)
           domain [Arabidopsis thaliana] gi|66792608|gb|AAY56406.1|
           At1g15330 [Arabidopsis thaliana]
           gi|110738205|dbj|BAF01033.1| hypothetical protein
           [Arabidopsis thaliana] gi|111074494|gb|ABH04620.1|
           At1g15330 [Arabidopsis thaliana]
           gi|332191183|gb|AEE29304.1| Cystathionine beta-synthase
           (CBS) protein [Arabidopsis thaliana]
          Length = 352

 Score =  127 bits (319), Expect = 1e-27
 Identities = 58/78 (74%), Positives = 66/78 (84%)
 Frame = -2

Query: 294 GHWIGAGGSMILESDKQTGAVRKHYIGMVTMFDILAHLADDDHGYGDLDERMSVPVSSVI 115
           GHWIGAGGSMI+ESDKQTG VRKHYIG++TM DILAH+A +D    DLD +MS  VSS+I
Sbjct: 59  GHWIGAGGSMIMESDKQTGVVRKHYIGILTMLDILAHIAGEDSNLSDLDRKMSSQVSSII 118

Query: 114 GHSLEGLSLWTLNPNTRI 61
           GH LEGLSLWTLNPNT +
Sbjct: 119 GHCLEGLSLWTLNPNTSV 136


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