BLASTX nr result

ID: Coptis23_contig00036425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036425
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535988.1| PREDICTED: U-box domain-containing protein 7...   117   1e-33
ref|XP_003555746.1| PREDICTED: U-box domain-containing protein 7...   117   2e-33
ref|XP_002285452.1| PREDICTED: U-box domain-containing protein 7...   116   4e-33
emb|CAN74845.1| hypothetical protein VITISV_037044 [Vitis vinifera]   116   4e-33
ref|XP_004134043.1| PREDICTED: U-box domain-containing protein 7...   116   4e-32

>ref|XP_003535988.1| PREDICTED: U-box domain-containing protein 72-like [Glycine max]
          Length = 525

 Score =  117 bits (294), Expect(2) = 1e-33
 Identities = 69/126 (54%), Positives = 82/126 (65%), Gaps = 4/126 (3%)
 Frame = +1

Query: 67  SCLISL*VGSGSDSGAEGYTSASPHPDGLLLSAGTFNSVVKIWDIKCQAGVVFSSDVHHG 246
           +CL  +   SGS   +EGYTSA+ HPDGL+L  GT  S+VKIWD+K QA V    D H G
Sbjct: 344 TCLTQVYDTSGS---SEGYTSAAFHPDGLILGTGTTESLVKIWDVKSQANVA-RFDGHAG 399

Query: 247 LVTAISFSEDCNTFATAAHDGVKLWD---VQNFRTIASY-GHAPTHSVEFTRGGKYVAVA 414
            VTAISFSE+    ATAAHDGVKLWD   ++NFR  A Y    PT SVEF   G Y+AVA
Sbjct: 400 PVTAISFSENGYFLATAAHDGVKLWDLRKLKNFRNFAPYDSETPTSSVEFDHSGSYLAVA 459

Query: 415 GLGVSL 432
           G  + +
Sbjct: 460 GSDIRI 465



 Score = 50.8 bits (120), Expect(2) = 1e-33
 Identities = 24/42 (57%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
 Frame = +2

Query: 440 SDESCIN-FPDLSGTGVGTCVQFRRDGNYFTVGSMDSSVRIY 562
           S+ +CI  FPDLSGTG  TCV+F  D  Y  VGSMD ++RI+
Sbjct: 473 SEWNCIKTFPDLSGTGKNTCVKFGSDSKYIAVGSMDRNLRIF 514


>ref|XP_003555746.1| PREDICTED: U-box domain-containing protein 72 [Glycine max]
          Length = 525

 Score =  117 bits (294), Expect(2) = 2e-33
 Identities = 69/126 (54%), Positives = 82/126 (65%), Gaps = 4/126 (3%)
 Frame = +1

Query: 67  SCLISL*VGSGSDSGAEGYTSASPHPDGLLLSAGTFNSVVKIWDIKCQAGVVFSSDVHHG 246
           +CL  +   SGS   +EGYTSA+ HPDGL+L  GT  S+VKIWD+K QA V    D H G
Sbjct: 344 TCLTQVYDTSGS---SEGYTSAAFHPDGLILGTGTTESLVKIWDVKSQANVA-RFDGHAG 399

Query: 247 LVTAISFSEDCNTFATAAHDGVKLWD---VQNFRTIASY-GHAPTHSVEFTRGGKYVAVA 414
            VTAISFSE+    ATAAHDGVKLWD   ++NFR  A Y    PT SVEF   G Y+AVA
Sbjct: 400 PVTAISFSENGYFLATAAHDGVKLWDLRKLKNFRNFAPYDSETPTSSVEFDHSGSYLAVA 459

Query: 415 GLGVSL 432
           G  + +
Sbjct: 460 GSDIRI 465



 Score = 50.4 bits (119), Expect(2) = 2e-33
 Identities = 24/42 (57%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
 Frame = +2

Query: 440 SDESCIN-FPDLSGTGVGTCVQFRRDGNYFTVGSMDSSVRIY 562
           S+ +CI  FPDLSGTG  TCV+F  D  Y  VGSMD ++RI+
Sbjct: 473 SEWNCIKTFPDLSGTGKNTCVKFGPDSKYIAVGSMDRNLRIF 514


>ref|XP_002285452.1| PREDICTED: U-box domain-containing protein 72 [Vitis vinifera]
           gi|296083725|emb|CBI23714.3| unnamed protein product
           [Vitis vinifera]
          Length = 524

 Score =  116 bits (291), Expect(2) = 4e-33
 Identities = 63/108 (58%), Positives = 76/108 (70%), Gaps = 4/108 (3%)
 Frame = +1

Query: 106 SGAEGYTSASPHPDGLLLSAGTFNSVVKIWDIKCQAGVVFSSDVHHGLVTAISFSEDCNT 285
           SG+EGYTSA+ HPDGL+L  GT  ++VKIWD+K QA V    D H G VTAISFSE+   
Sbjct: 353 SGSEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVA-RFDGHVGAVTAISFSENGYF 411

Query: 286 FATAAHDGVKLWD---VQNFRTIASY-GHAPTHSVEFTRGGKYVAVAG 417
            ATAAHDGVKLWD   ++NFRT   Y  +  T+SVEF   G Y+A+AG
Sbjct: 412 LATAAHDGVKLWDLRKLRNFRTFTPYDSNTATNSVEFDHSGNYLAIAG 459



 Score = 50.4 bits (119), Expect(2) = 4e-33
 Identities = 24/42 (57%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
 Frame = +2

Query: 440 SDESCIN-FPDLSGTGVGTCVQFRRDGNYFTVGSMDSSVRIY 562
           S+ +CI  FPDLSGTG  TCV+F  D  Y  VGSMD ++RI+
Sbjct: 472 SEWNCIKTFPDLSGTGKATCVKFGPDAKYLAVGSMDRNLRIF 513


>emb|CAN74845.1| hypothetical protein VITISV_037044 [Vitis vinifera]
          Length = 247

 Score =  116 bits (291), Expect(2) = 4e-33
 Identities = 63/108 (58%), Positives = 76/108 (70%), Gaps = 4/108 (3%)
 Frame = +1

Query: 106 SGAEGYTSASPHPDGLLLSAGTFNSVVKIWDIKCQAGVVFSSDVHHGLVTAISFSEDCNT 285
           SG+EGYTSA+ HPDGL+L  GT  ++VKIWD+K QA V    D H G VTAISFSE+   
Sbjct: 76  SGSEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVA-RFDGHVGAVTAISFSENGYF 134

Query: 286 FATAAHDGVKLWD---VQNFRTIASY-GHAPTHSVEFTRGGKYVAVAG 417
            ATAAHDGVKLWD   ++NFRT   Y  +  T+SVEF   G Y+A+AG
Sbjct: 135 LATAAHDGVKLWDLRKLRNFRTFTPYDSNTATNSVEFDHSGSYLAIAG 182



 Score = 50.4 bits (119), Expect(2) = 4e-33
 Identities = 24/42 (57%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
 Frame = +2

Query: 440 SDESCIN-FPDLSGTGVGTCVQFRRDGNYFTVGSMDSSVRIY 562
           S+ +CI  FPDLSGTG  TCV+F  D  Y  VGSMD ++RI+
Sbjct: 195 SEWNCIKTFPDLSGTGKATCVKFGPDAKYLAVGSMDRNLRIF 236


>ref|XP_004134043.1| PREDICTED: U-box domain-containing protein 72-like [Cucumis
           sativus]
          Length = 522

 Score =  116 bits (291), Expect(2) = 4e-32
 Identities = 63/109 (57%), Positives = 75/109 (68%), Gaps = 4/109 (3%)
 Frame = +1

Query: 103 DSGAEGYTSASPHPDGLLLSAGTFNSVVKIWDIKCQAGVVFSSDVHHGLVTAISFSEDCN 282
           DS  EGYTSA+ HPDGL+L  GT  ++VKIWD+K Q  V    D H G VTAISFSE+  
Sbjct: 350 DSETEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQKNVA-KFDGHVGAVTAISFSENGY 408

Query: 283 TFATAAHDGVKLWD---VQNFRTIASY-GHAPTHSVEFTRGGKYVAVAG 417
             ATAAHDGVKLWD   ++NFRT A Y    PT+SV+F   G Y+A+AG
Sbjct: 409 FLATAAHDGVKLWDLRKLKNFRTFAPYDSDTPTNSVDFDHSGSYLAIAG 457



 Score = 47.0 bits (110), Expect(2) = 4e-32
 Identities = 22/42 (52%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
 Frame = +2

Query: 440 SDESCIN-FPDLSGTGVGTCVQFRRDGNYFTVGSMDSSVRIY 562
           S+ +CI   PDLSGTG  TC++F  D  Y  VGSMD ++RI+
Sbjct: 470 SEWNCIKTLPDLSGTGKATCLKFGPDAKYLAVGSMDRNLRIF 511


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