BLASTX nr result
ID: Coptis23_contig00036425
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00036425 (567 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003535988.1| PREDICTED: U-box domain-containing protein 7... 117 1e-33 ref|XP_003555746.1| PREDICTED: U-box domain-containing protein 7... 117 2e-33 ref|XP_002285452.1| PREDICTED: U-box domain-containing protein 7... 116 4e-33 emb|CAN74845.1| hypothetical protein VITISV_037044 [Vitis vinifera] 116 4e-33 ref|XP_004134043.1| PREDICTED: U-box domain-containing protein 7... 116 4e-32 >ref|XP_003535988.1| PREDICTED: U-box domain-containing protein 72-like [Glycine max] Length = 525 Score = 117 bits (294), Expect(2) = 1e-33 Identities = 69/126 (54%), Positives = 82/126 (65%), Gaps = 4/126 (3%) Frame = +1 Query: 67 SCLISL*VGSGSDSGAEGYTSASPHPDGLLLSAGTFNSVVKIWDIKCQAGVVFSSDVHHG 246 +CL + SGS +EGYTSA+ HPDGL+L GT S+VKIWD+K QA V D H G Sbjct: 344 TCLTQVYDTSGS---SEGYTSAAFHPDGLILGTGTTESLVKIWDVKSQANVA-RFDGHAG 399 Query: 247 LVTAISFSEDCNTFATAAHDGVKLWD---VQNFRTIASY-GHAPTHSVEFTRGGKYVAVA 414 VTAISFSE+ ATAAHDGVKLWD ++NFR A Y PT SVEF G Y+AVA Sbjct: 400 PVTAISFSENGYFLATAAHDGVKLWDLRKLKNFRNFAPYDSETPTSSVEFDHSGSYLAVA 459 Query: 415 GLGVSL 432 G + + Sbjct: 460 GSDIRI 465 Score = 50.8 bits (120), Expect(2) = 1e-33 Identities = 24/42 (57%), Positives = 30/42 (71%), Gaps = 1/42 (2%) Frame = +2 Query: 440 SDESCIN-FPDLSGTGVGTCVQFRRDGNYFTVGSMDSSVRIY 562 S+ +CI FPDLSGTG TCV+F D Y VGSMD ++RI+ Sbjct: 473 SEWNCIKTFPDLSGTGKNTCVKFGSDSKYIAVGSMDRNLRIF 514 >ref|XP_003555746.1| PREDICTED: U-box domain-containing protein 72 [Glycine max] Length = 525 Score = 117 bits (294), Expect(2) = 2e-33 Identities = 69/126 (54%), Positives = 82/126 (65%), Gaps = 4/126 (3%) Frame = +1 Query: 67 SCLISL*VGSGSDSGAEGYTSASPHPDGLLLSAGTFNSVVKIWDIKCQAGVVFSSDVHHG 246 +CL + SGS +EGYTSA+ HPDGL+L GT S+VKIWD+K QA V D H G Sbjct: 344 TCLTQVYDTSGS---SEGYTSAAFHPDGLILGTGTTESLVKIWDVKSQANVA-RFDGHAG 399 Query: 247 LVTAISFSEDCNTFATAAHDGVKLWD---VQNFRTIASY-GHAPTHSVEFTRGGKYVAVA 414 VTAISFSE+ ATAAHDGVKLWD ++NFR A Y PT SVEF G Y+AVA Sbjct: 400 PVTAISFSENGYFLATAAHDGVKLWDLRKLKNFRNFAPYDSETPTSSVEFDHSGSYLAVA 459 Query: 415 GLGVSL 432 G + + Sbjct: 460 GSDIRI 465 Score = 50.4 bits (119), Expect(2) = 2e-33 Identities = 24/42 (57%), Positives = 30/42 (71%), Gaps = 1/42 (2%) Frame = +2 Query: 440 SDESCIN-FPDLSGTGVGTCVQFRRDGNYFTVGSMDSSVRIY 562 S+ +CI FPDLSGTG TCV+F D Y VGSMD ++RI+ Sbjct: 473 SEWNCIKTFPDLSGTGKNTCVKFGPDSKYIAVGSMDRNLRIF 514 >ref|XP_002285452.1| PREDICTED: U-box domain-containing protein 72 [Vitis vinifera] gi|296083725|emb|CBI23714.3| unnamed protein product [Vitis vinifera] Length = 524 Score = 116 bits (291), Expect(2) = 4e-33 Identities = 63/108 (58%), Positives = 76/108 (70%), Gaps = 4/108 (3%) Frame = +1 Query: 106 SGAEGYTSASPHPDGLLLSAGTFNSVVKIWDIKCQAGVVFSSDVHHGLVTAISFSEDCNT 285 SG+EGYTSA+ HPDGL+L GT ++VKIWD+K QA V D H G VTAISFSE+ Sbjct: 353 SGSEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVA-RFDGHVGAVTAISFSENGYF 411 Query: 286 FATAAHDGVKLWD---VQNFRTIASY-GHAPTHSVEFTRGGKYVAVAG 417 ATAAHDGVKLWD ++NFRT Y + T+SVEF G Y+A+AG Sbjct: 412 LATAAHDGVKLWDLRKLRNFRTFTPYDSNTATNSVEFDHSGNYLAIAG 459 Score = 50.4 bits (119), Expect(2) = 4e-33 Identities = 24/42 (57%), Positives = 30/42 (71%), Gaps = 1/42 (2%) Frame = +2 Query: 440 SDESCIN-FPDLSGTGVGTCVQFRRDGNYFTVGSMDSSVRIY 562 S+ +CI FPDLSGTG TCV+F D Y VGSMD ++RI+ Sbjct: 472 SEWNCIKTFPDLSGTGKATCVKFGPDAKYLAVGSMDRNLRIF 513 >emb|CAN74845.1| hypothetical protein VITISV_037044 [Vitis vinifera] Length = 247 Score = 116 bits (291), Expect(2) = 4e-33 Identities = 63/108 (58%), Positives = 76/108 (70%), Gaps = 4/108 (3%) Frame = +1 Query: 106 SGAEGYTSASPHPDGLLLSAGTFNSVVKIWDIKCQAGVVFSSDVHHGLVTAISFSEDCNT 285 SG+EGYTSA+ HPDGL+L GT ++VKIWD+K QA V D H G VTAISFSE+ Sbjct: 76 SGSEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVA-RFDGHVGAVTAISFSENGYF 134 Query: 286 FATAAHDGVKLWD---VQNFRTIASY-GHAPTHSVEFTRGGKYVAVAG 417 ATAAHDGVKLWD ++NFRT Y + T+SVEF G Y+A+AG Sbjct: 135 LATAAHDGVKLWDLRKLRNFRTFTPYDSNTATNSVEFDHSGSYLAIAG 182 Score = 50.4 bits (119), Expect(2) = 4e-33 Identities = 24/42 (57%), Positives = 30/42 (71%), Gaps = 1/42 (2%) Frame = +2 Query: 440 SDESCIN-FPDLSGTGVGTCVQFRRDGNYFTVGSMDSSVRIY 562 S+ +CI FPDLSGTG TCV+F D Y VGSMD ++RI+ Sbjct: 195 SEWNCIKTFPDLSGTGKATCVKFGPDAKYLAVGSMDRNLRIF 236 >ref|XP_004134043.1| PREDICTED: U-box domain-containing protein 72-like [Cucumis sativus] Length = 522 Score = 116 bits (291), Expect(2) = 4e-32 Identities = 63/109 (57%), Positives = 75/109 (68%), Gaps = 4/109 (3%) Frame = +1 Query: 103 DSGAEGYTSASPHPDGLLLSAGTFNSVVKIWDIKCQAGVVFSSDVHHGLVTAISFSEDCN 282 DS EGYTSA+ HPDGL+L GT ++VKIWD+K Q V D H G VTAISFSE+ Sbjct: 350 DSETEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQKNVA-KFDGHVGAVTAISFSENGY 408 Query: 283 TFATAAHDGVKLWD---VQNFRTIASY-GHAPTHSVEFTRGGKYVAVAG 417 ATAAHDGVKLWD ++NFRT A Y PT+SV+F G Y+A+AG Sbjct: 409 FLATAAHDGVKLWDLRKLKNFRTFAPYDSDTPTNSVDFDHSGSYLAIAG 457 Score = 47.0 bits (110), Expect(2) = 4e-32 Identities = 22/42 (52%), Positives = 29/42 (69%), Gaps = 1/42 (2%) Frame = +2 Query: 440 SDESCIN-FPDLSGTGVGTCVQFRRDGNYFTVGSMDSSVRIY 562 S+ +CI PDLSGTG TC++F D Y VGSMD ++RI+ Sbjct: 470 SEWNCIKTLPDLSGTGKATCLKFGPDAKYLAVGSMDRNLRIF 511