BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036414
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325015.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|NP_001056520.1| Os05g0596500 [Oryza sativa Japonica Group] g...    59   4e-07
emb|CBI17870.3| unnamed protein product [Vitis vinifera]               58   9e-07
ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like...    58   9e-07
ref|NP_194618.3| E3 ubiquitin-protein ligase ATL42 [Arabidopsis ...    57   1e-06

>ref|XP_002325015.1| predicted protein [Populus trichocarpa] gi|222866449|gb|EEF03580.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/49 (55%), Positives = 38/49 (77%)
 Frame = +3

Query: 138 QAPPPLIEDDKSPRMTASSFRPSVAVVVGVLSIMFSLTFLLLIYAKFCH 284
           QA    I+ ++  +   S+FRPS+AVV+G+L ++FSLTF+LLIYAKFCH
Sbjct: 19  QAQNTFIQGNEPSQDAVSNFRPSLAVVIGILFLIFSLTFILLIYAKFCH 67


>ref|NP_001056520.1| Os05g0596500 [Oryza sativa Japonica Group]
           gi|55733884|gb|AAV59391.1| unknown protein [Oryza sativa
           Japonica Group] gi|57900673|gb|AAW57798.1| unknown
           protein [Oryza sativa Japonica Group]
           gi|113580071|dbj|BAF18434.1| Os05g0596500 [Oryza sativa
           Japonica Group] gi|215697912|dbj|BAG92154.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222632790|gb|EEE64922.1| hypothetical protein
           OsJ_19782 [Oryza sativa Japonica Group]
          Length = 385

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 25/35 (71%), Positives = 33/35 (94%)
 Frame = +3

Query: 192 SFRPSVAVVVGVLSIMFSLTFLLLIYAKFCHNTAP 296
           SFRPSVA+VVG+ +++FSLTFLLL+YAKFCH ++P
Sbjct: 47  SFRPSVAIVVGIFTMIFSLTFLLLMYAKFCHPSSP 81


>emb|CBI17870.3| unnamed protein product [Vitis vinifera]
          Length = 457

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/49 (59%), Positives = 36/49 (73%)
 Frame = +3

Query: 135 SQAPPPLIEDDKSPRMTASSFRPSVAVVVGVLSIMFSLTFLLLIYAKFC 281
           SQ+PP  +     PR   S FRPS+AV+VGVL+ MFS+TFLLL+YAK C
Sbjct: 34  SQSPP--LPPPALPRPNFSPFRPSIAVIVGVLTTMFSITFLLLLYAKHC 80


>ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like [Vitis vinifera]
          Length = 404

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/49 (59%), Positives = 36/49 (73%)
 Frame = +3

Query: 135 SQAPPPLIEDDKSPRMTASSFRPSVAVVVGVLSIMFSLTFLLLIYAKFC 281
           SQ+PP  +     PR   S FRPS+AV+VGVL+ MFS+TFLLL+YAK C
Sbjct: 34  SQSPP--LPPPALPRPNFSPFRPSIAVIVGVLTTMFSITFLLLLYAKHC 80


>ref|NP_194618.3| E3 ubiquitin-protein ligase ATL42 [Arabidopsis thaliana]
           gi|68565150|sp|Q5XF85.2|ATL42_ARATH RecName: Full=E3
           ubiquitin-protein ligase ATL42; AltName: Full=RING-H2
           finger protein ATL42; Flags: Precursor
           gi|4972078|emb|CAB43903.1| putative protein [Arabidopsis
           thaliana] gi|7269744|emb|CAB81477.1| putative protein
           [Arabidopsis thaliana] gi|66865954|gb|AAY57611.1| RING
           finger family protein [Arabidopsis thaliana]
           gi|332660159|gb|AEE85559.1| E3 ubiquitin-protein ligase
           ATL42 [Arabidopsis thaliana]
          Length = 432

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/52 (53%), Positives = 36/52 (69%)
 Frame = +3

Query: 129 AQSQAPPPLIEDDKSPRMTASSFRPSVAVVVGVLSIMFSLTFLLLIYAKFCH 284
           A +Q PPP    D       ++F PS+AVV GVL+IMF+LTF+LL+YAK CH
Sbjct: 16  ASAQTPPPFRNGD-----LVANFEPSLAVVTGVLAIMFALTFVLLVYAKCCH 62