BLASTX nr result

ID: Coptis23_contig00036412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036412
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300666.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
ref|XP_002510635.1| ceramidase, putative [Ricinus communis] gi|2...   167   6e-40
emb|CBI18885.3| unnamed protein product [Vitis vinifera]              167   1e-39
ref|XP_002284820.1| PREDICTED: neutral ceramidase-like [Vitis vi...   167   1e-39
ref|XP_003543818.1| PREDICTED: neutral ceramidase-like [Glycine ...   160   8e-38

>ref|XP_002300666.1| predicted protein [Populus trichocarpa] gi|222842392|gb|EEE79939.1|
           predicted protein [Populus trichocarpa]
          Length = 491

 Score =  172 bits (436), Expect = 3e-41
 Identities = 82/101 (81%), Positives = 90/101 (89%)
 Frame = -2

Query: 394 SVFINTGEVENAGINRSPSAYLYNPAEERAKYPTNVDTQMTLLKFVDDNTGKNIGAFSWF 215
           SVFINTG+VENAGINRSPSAYL NPAEERA+YP NVD +MTLLKFVD  +GK+IGAFSW+
Sbjct: 170 SVFINTGDVENAGINRSPSAYLLNPAEERARYPANVDKEMTLLKFVDSASGKSIGAFSWY 229

Query: 214 ATHGTSMSKDNKLISGDNKGAAARFFEDWFTSTTITNCTGV 92
           ATHGTSMS+DNKLISGDNKGAAARFFEDWFTST   +   V
Sbjct: 230 ATHGTSMSRDNKLISGDNKGAAARFFEDWFTSTEANSSRSV 270


>ref|XP_002510635.1| ceramidase, putative [Ricinus communis] gi|223551336|gb|EEF52822.1|
           ceramidase, putative [Ricinus communis]
          Length = 750

 Score =  167 bits (424), Expect = 6e-40
 Identities = 79/93 (84%), Positives = 86/93 (92%)
 Frame = -2

Query: 394 SVFINTGEVENAGINRSPSAYLYNPAEERAKYPTNVDTQMTLLKFVDDNTGKNIGAFSWF 215
           S+FINTG+VE AGINRSPSAYL NPAEERA+YP NVD +MTLLKFVD  TG +IGAFSW+
Sbjct: 171 SIFINTGDVETAGINRSPSAYLLNPAEERARYPANVDKEMTLLKFVDSATGISIGAFSWY 230

Query: 214 ATHGTSMSKDNKLISGDNKGAAARFFEDWFTST 116
           ATHGTSMS+DNKLISGDNKGAAARFFEDWFTST
Sbjct: 231 ATHGTSMSRDNKLISGDNKGAAARFFEDWFTST 263


>emb|CBI18885.3| unnamed protein product [Vitis vinifera]
          Length = 751

 Score =  167 bits (422), Expect = 1e-39
 Identities = 78/94 (82%), Positives = 89/94 (94%)
 Frame = -2

Query: 394 SVFINTGEVENAGINRSPSAYLYNPAEERAKYPTNVDTQMTLLKFVDDNTGKNIGAFSWF 215
           SVFIN G+VENAGI+RSPSAYL NPA+ERA+Y T+VDT+MTLLKF++  +GK+IGAFSWF
Sbjct: 170 SVFINKGDVENAGISRSPSAYLVNPADERARYSTDVDTEMTLLKFINGESGKSIGAFSWF 229

Query: 214 ATHGTSMSKDNKLISGDNKGAAARFFEDWFTSTT 113
           ATHGTSMSKDN+LISGDNKGAAARFFEDWFTSTT
Sbjct: 230 ATHGTSMSKDNRLISGDNKGAAARFFEDWFTSTT 263


>ref|XP_002284820.1| PREDICTED: neutral ceramidase-like [Vitis vinifera]
          Length = 752

 Score =  167 bits (422), Expect = 1e-39
 Identities = 78/94 (82%), Positives = 89/94 (94%)
 Frame = -2

Query: 394 SVFINTGEVENAGINRSPSAYLYNPAEERAKYPTNVDTQMTLLKFVDDNTGKNIGAFSWF 215
           SVFIN G+VENAGI+RSPSAYL NPA+ERA+Y T+VDT+MTLLKF++  +GK+IGAFSWF
Sbjct: 170 SVFINKGDVENAGISRSPSAYLVNPADERARYSTDVDTEMTLLKFINGESGKSIGAFSWF 229

Query: 214 ATHGTSMSKDNKLISGDNKGAAARFFEDWFTSTT 113
           ATHGTSMSKDN+LISGDNKGAAARFFEDWFTSTT
Sbjct: 230 ATHGTSMSKDNRLISGDNKGAAARFFEDWFTSTT 263


>ref|XP_003543818.1| PREDICTED: neutral ceramidase-like [Glycine max]
          Length = 746

 Score =  160 bits (406), Expect = 8e-38
 Identities = 77/102 (75%), Positives = 88/102 (86%), Gaps = 3/102 (2%)
 Frame = -2

Query: 394 SVFINTGEVENAGINRSPSAYLYNPAEERAKYPTNVDTQMTLLKFVDDNTGKNIGAFSWF 215
           S+F+NTG+V++AGINRSPSAYL NPA+ERA+YPTNVDTQMTL++FVD  +GKNIGAFSWF
Sbjct: 167 SIFMNTGDVKDAGINRSPSAYLQNPADERARYPTNVDTQMTLMRFVDGASGKNIGAFSWF 226

Query: 214 ATHGTSMSKDNKLISGDNKGAAARFFEDWFTS---TTITNCT 98
            THGTSMS  NKLISGDNKG AAR FEDWF S   +T TN T
Sbjct: 227 PTHGTSMSNQNKLISGDNKGVAARLFEDWFASQNNSTNTNST 268


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