BLASTX nr result

ID: Coptis23_contig00036407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036407
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001754127.1| predicted protein [Physcomitrella patens sub...    56   3e-06
ref|XP_001780774.1| predicted protein [Physcomitrella patens sub...    56   3e-06

>ref|XP_001754127.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162694681|gb|EDQ81028.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 428

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = -3

Query: 226 QVQKTVCDKYDTEFYPRYKKWCDDYLFLLRH 134
           Q QK  CDK+D EFYP+YKKWCDDY FL++H
Sbjct: 273 QTQKDACDKHDPEFYPKYKKWCDDY-FLIKH 302


>ref|XP_001780774.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162667792|gb|EDQ54413.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 315

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 22/31 (70%), Positives = 27/31 (87%)
 Frame = -3

Query: 226 QVQKTVCDKYDTEFYPRYKKWCDDYLFLLRH 134
           QVQK  CDK+D EFYP++KKWCDDY FL++H
Sbjct: 157 QVQKQACDKHDPEFYPKFKKWCDDY-FLIKH 186


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