BLASTX nr result

ID: Coptis23_contig00036389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036389
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD66788.1| orf184 [Beta vulgaris subsp. vulgaris]                 70   8e-12

>dbj|BAD66788.1| orf184 [Beta vulgaris subsp. vulgaris]
          Length = 184

 Score = 70.1 bits (170), Expect(2) = 8e-12
 Identities = 33/37 (89%), Positives = 34/37 (91%)
 Frame = -3

Query: 212 MKRLLHNFIIRSGTSPLFFGRKGYPSLSSTEEPAFDS 102
           MKRLLHN  IRSGT PLFFGRKGYPSLSST+EPAFDS
Sbjct: 1   MKRLLHNLKIRSGTYPLFFGRKGYPSLSSTDEPAFDS 37



 Score = 24.6 bits (52), Expect(2) = 8e-12
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = -2

Query: 63 RFDPSPDQIRVP 28
          RFDPSPDQI  P
Sbjct: 50 RFDPSPDQILNP 61


Top