BLASTX nr result

ID: Coptis23_contig00036358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036358
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513312.1| Mitochondrial deoxynucleotide carrier, putat...   257   1e-66
ref|XP_002311894.1| predicted protein [Populus trichocarpa] gi|2...   252   5e-65
gb|ABK96044.1| unknown [Populus trichocarpa]                          252   5e-65
ref|XP_004141752.1| PREDICTED: protein brittle-1, chloroplastic/...   249   4e-64
dbj|BAJ92157.1| predicted protein [Hordeum vulgare subsp. vulgare]    248   9e-64

>ref|XP_002513312.1| Mitochondrial deoxynucleotide carrier, putative [Ricinus communis]
           gi|223547220|gb|EEF48715.1| Mitochondrial
           deoxynucleotide carrier, putative [Ricinus communis]
          Length = 375

 Score =  257 bits (657), Expect = 1e-66
 Identities = 122/144 (84%), Positives = 132/144 (91%)
 Frame = -3

Query: 656 KMYRDGGIGGMYAGLCPTLIGMLPYSTCYYFMYETVKNSYCQAKKKKKLNRAEMLVLGAL 477
           K+Y DGGIG  YAG+ PTLIGMLPYSTCYYFMYET+K SYC+ KKKK LNR EML++GAL
Sbjct: 232 KIYSDGGIGAFYAGISPTLIGMLPYSTCYYFMYETMKKSYCETKKKKSLNRPEMLLVGAL 291

Query: 476 SGLTASTISFPLEVARKRLMVGALQGKCPANMAAALSEVIREEGLRGLYRGWGASCLKVM 297
           +G TASTISFPLEVARKRLMVGALQGKCP +MAAALSEVIREEGL GLYRGWGASCLKVM
Sbjct: 292 AGFTASTISFPLEVARKRLMVGALQGKCPPHMAAALSEVIREEGLLGLYRGWGASCLKVM 351

Query: 296 PSSGITWMFYEAWKDILVIEKNLL 225
           PSSGITWMFYEAWKDIL++EK LL
Sbjct: 352 PSSGITWMFYEAWKDILLVEKRLL 375


>ref|XP_002311894.1| predicted protein [Populus trichocarpa] gi|222851714|gb|EEE89261.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  252 bits (643), Expect = 5e-65
 Identities = 118/144 (81%), Positives = 130/144 (90%)
 Frame = -3

Query: 656 KMYRDGGIGGMYAGLCPTLIGMLPYSTCYYFMYETVKNSYCQAKKKKKLNRAEMLVLGAL 477
           K+Y+DGGIG  YAG+ PTLIGMLPYSTCYYFMY+T+K SYC+ K KK LNR EML++GA 
Sbjct: 199 KIYKDGGIGAFYAGISPTLIGMLPYSTCYYFMYDTMKTSYCKGKNKKSLNRPEMLLIGAF 258

Query: 476 SGLTASTISFPLEVARKRLMVGALQGKCPANMAAALSEVIREEGLRGLYRGWGASCLKVM 297
           SG TAST+SFPLEVARKRLMVGALQGKCP +MAAALSEVIRE GL GLYRGWGASCLKVM
Sbjct: 259 SGFTASTLSFPLEVARKRLMVGALQGKCPPHMAAALSEVIREGGLMGLYRGWGASCLKVM 318

Query: 296 PSSGITWMFYEAWKDILVIEKNLL 225
           PSSGITWMFYEAWKDIL++EK LL
Sbjct: 319 PSSGITWMFYEAWKDILLVEKRLL 342


>gb|ABK96044.1| unknown [Populus trichocarpa]
          Length = 365

 Score =  252 bits (643), Expect = 5e-65
 Identities = 118/144 (81%), Positives = 130/144 (90%)
 Frame = -3

Query: 656 KMYRDGGIGGMYAGLCPTLIGMLPYSTCYYFMYETVKNSYCQAKKKKKLNRAEMLVLGAL 477
           K+Y+DGGIG  YAG+ PTLIGMLPYSTCYYFMY+T+K SYC+ K KK LNR EML++GA 
Sbjct: 222 KIYKDGGIGAFYAGISPTLIGMLPYSTCYYFMYDTMKTSYCKGKNKKSLNRPEMLLIGAF 281

Query: 476 SGLTASTISFPLEVARKRLMVGALQGKCPANMAAALSEVIREEGLRGLYRGWGASCLKVM 297
           SG TAST+SFPLEVARKRLMVGALQGKCP +MAAALSEVIRE GL GLYRGWGASCLKVM
Sbjct: 282 SGFTASTLSFPLEVARKRLMVGALQGKCPPHMAAALSEVIREGGLMGLYRGWGASCLKVM 341

Query: 296 PSSGITWMFYEAWKDILVIEKNLL 225
           PSSGITWMFYEAWKDIL++EK LL
Sbjct: 342 PSSGITWMFYEAWKDILLVEKRLL 365


>ref|XP_004141752.1| PREDICTED: protein brittle-1, chloroplastic/amyloplastic-like
           [Cucumis sativus] gi|449491783|ref|XP_004159002.1|
           PREDICTED: protein brittle-1,
           chloroplastic/amyloplastic-like [Cucumis sativus]
          Length = 381

 Score =  249 bits (635), Expect = 4e-64
 Identities = 116/144 (80%), Positives = 130/144 (90%)
 Frame = -3

Query: 656 KMYRDGGIGGMYAGLCPTLIGMLPYSTCYYFMYETVKNSYCQAKKKKKLNRAEMLVLGAL 477
           K+YRDGG+G  YAG+ PTL+GMLPYST YYFMYET+K +YC  KKK  LNR EML++GAL
Sbjct: 238 KIYRDGGLGAFYAGISPTLVGMLPYSTSYYFMYETMKKTYCLKKKKNSLNRIEMLLVGAL 297

Query: 476 SGLTASTISFPLEVARKRLMVGALQGKCPANMAAALSEVIREEGLRGLYRGWGASCLKVM 297
           SG TASTISFPLEVARKRLMVGALQGKCP NMAAA+SEVIREEGL+GLYRGWGASCLKVM
Sbjct: 298 SGFTASTISFPLEVARKRLMVGALQGKCPPNMAAAISEVIREEGLKGLYRGWGASCLKVM 357

Query: 296 PSSGITWMFYEAWKDILVIEKNLL 225
           PSSGITWMFYEAWKD+L++ +N L
Sbjct: 358 PSSGITWMFYEAWKDMLLVNRNHL 381


>dbj|BAJ92157.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 378

 Score =  248 bits (632), Expect = 9e-64
 Identities = 115/142 (80%), Positives = 130/142 (91%)
 Frame = -3

Query: 656 KMYRDGGIGGMYAGLCPTLIGMLPYSTCYYFMYETVKNSYCQAKKKKKLNRAEMLVLGAL 477
           K+YR  GI G+Y+GLCPTLIGMLPYSTCYYFMY+T+K SYC+  KKK L+R E+L++GAL
Sbjct: 233 KIYRTEGIRGLYSGLCPTLIGMLPYSTCYYFMYDTIKTSYCRLHKKKSLSRPELLIIGAL 292

Query: 476 SGLTASTISFPLEVARKRLMVGALQGKCPANMAAALSEVIREEGLRGLYRGWGASCLKVM 297
           +GLTASTISFPLEVARKRLMVGALQGKCP NM AALSEVIREEGL G+YRGWGASCLKVM
Sbjct: 293 TGLTASTISFPLEVARKRLMVGALQGKCPPNMVAALSEVIREEGLLGIYRGWGASCLKVM 352

Query: 296 PSSGITWMFYEAWKDILVIEKN 231
           P+SGITWMFYEAWKDIL+ EK+
Sbjct: 353 PNSGITWMFYEAWKDILLAEKD 374


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