BLASTX nr result

ID: Coptis23_contig00036351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036351
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277754.1| PREDICTED: ATP-dependent DNA helicase Q-like...   225   7e-57
emb|CBI27790.3| unnamed protein product [Vitis vinifera]              222   6e-56
ref|XP_003595317.1| ATP-dependent DNA helicase Q1 [Medicago trun...   213   2e-53
ref|XP_004141074.1| PREDICTED: ATP-dependent DNA helicase Q-like...   213   4e-53
gb|AAR14271.1| predicted protein [Populus tremula x Populus alba]     212   5e-53

>ref|XP_002277754.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Vitis
           vinifera]
          Length = 730

 Score =  225 bits (573), Expect = 7e-57
 Identities = 112/170 (65%), Positives = 125/170 (73%)
 Frame = -2

Query: 510 FRMGIDRKDVRTVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGIDDRRRMEFILSNP 331
           F MGIDRKDVR VCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGIDDR+RMEFILSN 
Sbjct: 316 FGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGIDDRKRMEFILSNA 375

Query: 330 ANKRLHPXXXXXXXXXXSLEDFNQMVEYCEGSFCRRRKILESFGEQVPTSLCQKSCDVCR 151
            +K+L            SL DF+ MVEYCEGS CRR+KILE+FGEQV  S+C+KSCD C+
Sbjct: 376 ESKKLQSSSSQDGMSKKSLADFSHMVEYCEGSSCRRKKILENFGEQVAASICRKSCDACK 435

Query: 150 HPKLVAKYLEELTCASNLHKANXXXXXXXXXXSGTAAEDQFTEFWNREDE 1
           HP LVAKYLEE   A  L + N          S    ++Q TEFWNR+DE
Sbjct: 436 HPNLVAKYLEEFASACALRQNNVFSRIFISSSSDLVDKEQLTEFWNRDDE 485


>emb|CBI27790.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  222 bits (565), Expect = 6e-56
 Identities = 110/168 (65%), Positives = 124/168 (73%)
 Frame = -2

Query: 504 MGIDRKDVRTVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGIDDRRRMEFILSNPAN 325
           +GIDRKDVR VCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGIDDR+RMEFILSN  +
Sbjct: 335 IGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGIDDRKRMEFILSNAES 394

Query: 324 KRLHPXXXXXXXXXXSLEDFNQMVEYCEGSFCRRRKILESFGEQVPTSLCQKSCDVCRHP 145
           K+L            SL DF+ MVEYCEGS CRR+KILE+FGEQV  S+C+KSCD C+HP
Sbjct: 395 KKLQSSSSQDGMSKKSLADFSHMVEYCEGSSCRRKKILENFGEQVAASICRKSCDACKHP 454

Query: 144 KLVAKYLEELTCASNLHKANXXXXXXXXXXSGTAAEDQFTEFWNREDE 1
            LVAKYLEE   A  L + N          S    ++Q TEFWNR+DE
Sbjct: 455 NLVAKYLEEFASACALRQNNVFSRIFISSSSDLVDKEQLTEFWNRDDE 502


>ref|XP_003595317.1| ATP-dependent DNA helicase Q1 [Medicago truncatula]
           gi|355484365|gb|AES65568.1| ATP-dependent DNA helicase
           Q1 [Medicago truncatula]
          Length = 776

 Score =  213 bits (543), Expect = 2e-53
 Identities = 118/194 (60%), Positives = 131/194 (67%), Gaps = 2/194 (1%)
 Frame = -2

Query: 576 ARWILFGALPLHTWMLGNNCFFFRMGIDRKDVRTVCHFNIPKSMEAFYQESGRAGRDQLP 397
           A  I +   P  +  L N    FRMGIDRKDVR VCHFNIPKSMEAFYQESGRAGRDQLP
Sbjct: 348 ATGIAWTTTPAESIGLPNLWCSFRMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLP 407

Query: 396 SRSLLYYGIDDRRRMEFILSNPANKRLHPXXXXXXXXXXSLEDFNQMVEYCEGSFCRRRK 217
           S SLLYYG+DDRRRMEFIL N  NK+             SL  FNQMVEYCEGS CRR+ 
Sbjct: 408 STSLLYYGVDDRRRMEFILRNSGNKKSQSSSSQEESTRMSLTAFNQMVEYCEGSGCRRKI 467

Query: 216 ILESFGEQVPTSLCQKSCDVCRHPKLVAKYLEELTCASNLHKANXXXXXXXXXXSGTAAE 37
           ILESFGEQV TSLC K+CD CRHP LVA+ LE+LT A +L +            S T A 
Sbjct: 468 ILESFGEQVTTSLCGKTCDSCRHPNLVARNLEDLTAACSLRQRG---GSRVFITSSTDAI 524

Query: 36  D--QFTEFWNREDE 1
           D  Q +EFWNR++E
Sbjct: 525 DGGQLSEFWNRDEE 538


>ref|XP_004141074.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Cucumis
           sativus] gi|449488107|ref|XP_004157941.1| PREDICTED:
           ATP-dependent DNA helicase Q-like 3-like [Cucumis
           sativus]
          Length = 729

 Score =  213 bits (541), Expect = 4e-53
 Identities = 110/173 (63%), Positives = 128/173 (73%), Gaps = 3/173 (1%)
 Frame = -2

Query: 510 FRMGIDRKDVRTVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGIDDRRRMEFILSN- 334
           F MGIDRKDVR VCHFNIPKSMEAFYQESGRAGRDQLPS+SLLYYGI+DRRRMEFIL N 
Sbjct: 316 FGMGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNR 375

Query: 333 -PANKRLHP-XXXXXXXXXXSLEDFNQMVEYCEGSFCRRRKILESFGEQVPTSLCQKSCD 160
             A+K++ P           SL DF QMVEYCEGS CRR++ILESFGEQVP S+C +SCD
Sbjct: 376 SSADKKILPSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCD 435

Query: 159 VCRHPKLVAKYLEELTCASNLHKANXXXXXXXXXXSGTAAEDQFTEFWNREDE 1
            C+HP ++A YLEELT  ++  + N          S T  ED+F+EFWN +DE
Sbjct: 436 ACKHPNIIAAYLEELT--TSAVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDE 486


>gb|AAR14271.1| predicted protein [Populus tremula x Populus alba]
          Length = 772

 Score =  212 bits (540), Expect = 5e-53
 Identities = 108/175 (61%), Positives = 125/175 (71%), Gaps = 5/175 (2%)
 Frame = -2

Query: 510 FRMGIDRKDVRTVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGIDDRRRMEFILSNP 331
           F MGIDRKDVR VCHFNIPKSME+FYQESGRAGRDQLPS+SLLYYG+DDR++MEFIL N 
Sbjct: 314 FGMGIDRKDVRMVCHFNIPKSMESFYQESGRAGRDQLPSKSLLYYGVDDRKKMEFILRNA 373

Query: 330 ANKRLHPXXXXXXXXXXSLEDFNQMVEYCEGSFCRRRKILESFGEQVPTSLCQKSCDVCR 151
            NK+L            SL DFN M+EYCEG+ CRR+KILESFGEQV  +LC+KSCD C+
Sbjct: 374 ENKKLQSSSSGGELSKKSLTDFNLMIEYCEGAGCRRKKILESFGEQVSATLCKKSCDACK 433

Query: 150 HPKLVAKYLEELTCASNLHKANXXXXXXXXXXSGTAAE-----DQFTEFWNREDE 1
           HP LVAKYLEELT  S   + N          +    E     +Q +EFWNR+DE
Sbjct: 434 HPNLVAKYLEELT-TSIARQRNGFSRVFMSRSTDMIDEEFRIDEQISEFWNRDDE 487


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