BLASTX nr result
ID: Coptis23_contig00036350
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00036350
(406 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like... 244 4e-63
emb|CBI35900.3| unnamed protein product [Vitis vinifera] 244 4e-63
ref|XP_002521362.1| ATP binding protein, putative [Ricinus commu... 243 9e-63
ref|XP_003627214.1| Midasin [Medicago truncatula] gi|355521236|g... 242 2e-62
gb|EEE51075.1| hypothetical protein OsJ_31772 [Oryza sativa Japo... 240 1e-61
>ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Vitis vinifera]
Length = 5286
Score = 244 bits (624), Expect = 4e-63
Identities = 121/135 (89%), Positives = 128/135 (94%)
Frame = +2
Query: 2 VLRAMQLKKPVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDA 181
VLRAMQL KPVLLEGSPGVGKTSLIVA+GK+SGH VVRINLSEQTDIMDLLGSDLPVE +
Sbjct: 1679 VLRAMQLAKPVLLEGSPGVGKTSLIVALGKFSGHPVVRINLSEQTDIMDLLGSDLPVESS 1738
Query: 182 EGMRFAWSDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCP 361
EG++FAWSDGILLQALK G WVLLDELNLAPQSVLEGLNAILDHRAEVFIPELG T+KCP
Sbjct: 1739 EGIKFAWSDGILLQALKQGSWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGVTFKCP 1798
Query: 362 TSFRVFACQNPSCQG 406
+SFRVFACQNPS QG
Sbjct: 1799 SSFRVFACQNPSSQG 1813
Score = 116 bits (290), Expect = 2e-24
Identities = 62/130 (47%), Positives = 86/130 (66%), Gaps = 1/130 (0%)
Frame = +2
Query: 8 RAMQLKK-PVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDAE 184
RA+ +K+ PVLL+G GKTSL+ + +GH VRIN E TD+ + LGS V DA
Sbjct: 1092 RAVLIKRYPVLLQGPTSSGKTSLVQYLAAITGHEFVRINNHEHTDLQEYLGSY--VTDAS 1149
Query: 185 GMRFAWSDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCPT 364
G + + +G+L++A++NG W++LDELNLAP VLE LN +LD E+F+PEL +T
Sbjct: 1150 G-KLVFHEGVLVKAVRNGYWIVLDELNLAPSDVLEALNRLLDDNRELFVPELRETIPAHP 1208
Query: 365 SFRVFACQNP 394
F +FA QNP
Sbjct: 1209 DFMLFATQNP 1218
Score = 76.3 bits (186), Expect = 2e-12
Identities = 48/127 (37%), Positives = 72/127 (56%)
Frame = +2
Query: 2 VLRAMQLKKPVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDA 181
VL A+ K PVLL G GVGKT+LI + + SG++V+ I++ +Q D L+GS + +E
Sbjct: 359 VLLAVSQKWPVLLYGPAGVGKTALISKLARDSGNQVLSIHMDDQIDGKTLIGSYVCME-- 416
Query: 182 EGMRFAWSDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCP 361
F W G L QA NG WV+ + ++ AP V L +L+ A F+ G+ +
Sbjct: 417 RPGEFRWQPGSLTQAAMNGFWVVFEGIDKAPSDVQSILLPLLE-GASSFLTSHGEAIRVA 475
Query: 362 TSFRVFA 382
SFR+F+
Sbjct: 476 ESFRLFS 482
Score = 60.8 bits (146), Expect = 1e-07
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Frame = +2
Query: 179 AEGMRFAWSDGILLQALKNGDWVLLDELNLAPQSVLEGLNAIL-DHRAEVFIPELGQTYK 355
+ GM F + +G + AL+NGDW+LLDE+NLAP L+ + +L D + + E G
Sbjct: 843 SSGMLFQFVEGAFVTALRNGDWILLDEVNLAPPETLQRVIGVLEDVNGSLCLAERGDASY 902
Query: 356 CP--TSFRVFACQNPS 397
P +FR+FAC NP+
Sbjct: 903 IPRHPNFRLFACMNPA 918
>emb|CBI35900.3| unnamed protein product [Vitis vinifera]
Length = 5267
Score = 244 bits (624), Expect = 4e-63
Identities = 121/135 (89%), Positives = 128/135 (94%)
Frame = +2
Query: 2 VLRAMQLKKPVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDA 181
VLRAMQL KPVLLEGSPGVGKTSLIVA+GK+SGH VVRINLSEQTDIMDLLGSDLPVE +
Sbjct: 1798 VLRAMQLAKPVLLEGSPGVGKTSLIVALGKFSGHPVVRINLSEQTDIMDLLGSDLPVESS 1857
Query: 182 EGMRFAWSDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCP 361
EG++FAWSDGILLQALK G WVLLDELNLAPQSVLEGLNAILDHRAEVFIPELG T+KCP
Sbjct: 1858 EGIKFAWSDGILLQALKQGSWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGVTFKCP 1917
Query: 362 TSFRVFACQNPSCQG 406
+SFRVFACQNPS QG
Sbjct: 1918 SSFRVFACQNPSSQG 1932
Score = 76.3 bits (186), Expect = 2e-12
Identities = 48/127 (37%), Positives = 72/127 (56%)
Frame = +2
Query: 2 VLRAMQLKKPVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDA 181
VL A+ K PVLL G GVGKT+LI + + SG++V+ I++ +Q D L+GS + +E
Sbjct: 300 VLLAVSQKWPVLLYGPAGVGKTALISKLARDSGNQVLSIHMDDQIDGKTLIGSYVCME-- 357
Query: 182 EGMRFAWSDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCP 361
F W G L QA NG WV+ + ++ AP V L +L+ A F+ G+ +
Sbjct: 358 RPGEFRWQPGSLTQAAMNGFWVVFEGIDKAPSDVQSILLPLLE-GASSFLTSHGEAIRVA 416
Query: 362 TSFRVFA 382
SFR+F+
Sbjct: 417 ESFRLFS 423
Score = 65.1 bits (157), Expect = 6e-09
Identities = 46/130 (35%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Frame = +2
Query: 8 RAMQLKK-PVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDAE 184
RA+ +K+ PVLL+G GKTSL+ + +GH VRIN E TD+ + LGS V DA
Sbjct: 876 RAVLIKRYPVLLQGPTSSGKTSLVQYLAAITGHEFVRINNHEHTDLQEYLGS--YVTDAS 933
Query: 185 GMRFAWSDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCPT 364
G E LN +LD E+F+PEL +T
Sbjct: 934 GKLV----------------------------FHEALNRLLDDNRELFVPELRETIPAHP 965
Query: 365 SFRVFACQNP 394
F +FA QNP
Sbjct: 966 DFMLFATQNP 975
>ref|XP_002521362.1| ATP binding protein, putative [Ricinus communis]
gi|223539440|gb|EEF41030.1| ATP binding protein, putative
[Ricinus communis]
Length = 5282
Score = 243 bits (621), Expect = 9e-63
Identities = 120/135 (88%), Positives = 127/135 (94%)
Frame = +2
Query: 2 VLRAMQLKKPVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDA 181
VLRAMQL KPVLLEGSPGVGKTSLI+A+GKYSGH+VVRINLSEQTD+MDLLGSDLPVE
Sbjct: 1664 VLRAMQLPKPVLLEGSPGVGKTSLIIALGKYSGHKVVRINLSEQTDLMDLLGSDLPVESD 1723
Query: 182 EGMRFAWSDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCP 361
EGM+FAWSDGILLQALK G WVLLDELNLAPQSVLEGLNAILDHRAEVFIPELG T+KCP
Sbjct: 1724 EGMKFAWSDGILLQALKEGCWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGLTFKCP 1783
Query: 362 TSFRVFACQNPSCQG 406
+SFRVFACQNP QG
Sbjct: 1784 SSFRVFACQNPFSQG 1798
Score = 119 bits (298), Expect = 3e-25
Identities = 63/130 (48%), Positives = 88/130 (67%), Gaps = 1/130 (0%)
Frame = +2
Query: 8 RAMQLKK-PVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDAE 184
RA+ +K+ PVLL+G GKTSL+ + SGH VRIN E TD+ + LGS + DA
Sbjct: 1079 RAVFIKRYPVLLQGPTSSGKTSLVQYLAAKSGHEFVRINNHEHTDLQEYLGSY--ISDAH 1136
Query: 185 GMRFAWSDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCPT 364
G + + +G+L++A++NG W++LDELNLAP VLE LN +LD E+F+PEL QT +
Sbjct: 1137 G-KLIFQEGVLVKAVRNGYWIVLDELNLAPSDVLEALNRLLDDNRELFVPELRQTIRAHP 1195
Query: 365 SFRVFACQNP 394
+F +FA QNP
Sbjct: 1196 NFMLFATQNP 1205
Score = 78.2 bits (191), Expect = 7e-13
Identities = 47/127 (37%), Positives = 74/127 (58%)
Frame = +2
Query: 2 VLRAMQLKKPVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDA 181
VL A+ + P+LL G G GKT+LI + + SG++V+ I++ EQ D L+G+ + E
Sbjct: 348 VLLAVSQRWPILLYGPAGAGKTALISKLAQDSGNQVLTIHMDEQIDGKTLIGTYVCAE-- 405
Query: 182 EGMRFAWSDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCP 361
+ F W G L+QA+ NG WV+ ++++ AP V L +L+ A FI G+ P
Sbjct: 406 QPGEFRWQPGSLIQAVLNGYWVVFEDIDKAPSDVQSILLPLLE-GASFFITGHGEEITVP 464
Query: 362 TSFRVFA 382
SFR+F+
Sbjct: 465 ESFRLFS 471
Score = 59.3 bits (142), Expect = 3e-07
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Frame = +2
Query: 179 AEGMRFAWSDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILD-HRAEVFIPELGQTYK 355
+ GM F++ +G + AL+NG+W+LLDE+NLAP L+ + +L+ + + E G
Sbjct: 831 SSGMIFSFVEGAFVTALRNGEWILLDEINLAPPETLQRIVGVLEGDYGSLCLAERGDISH 890
Query: 356 CP--TSFRVFACQNPS 397
P SFR+F C NP+
Sbjct: 891 IPRHPSFRIFGCMNPA 906
>ref|XP_003627214.1| Midasin [Medicago truncatula] gi|355521236|gb|AET01690.1| Midasin
[Medicago truncatula]
Length = 5078
Score = 242 bits (618), Expect = 2e-62
Identities = 120/135 (88%), Positives = 126/135 (93%)
Frame = +2
Query: 2 VLRAMQLKKPVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDA 181
VLRAMQL KPVLLEGSPGVGKTSLI A+GKYSGH+VVRINLSEQTD+MDLLGSDLPVE
Sbjct: 1352 VLRAMQLPKPVLLEGSPGVGKTSLITALGKYSGHKVVRINLSEQTDMMDLLGSDLPVESD 1411
Query: 182 EGMRFAWSDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCP 361
EGM+F+WSDGILLQAL+ G WVLLDELNLAPQSVLEGLNAILDHRAEVFIPELG TYKCP
Sbjct: 1412 EGMKFSWSDGILLQALQEGCWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGNTYKCP 1471
Query: 362 TSFRVFACQNPSCQG 406
SFRVFACQNPS QG
Sbjct: 1472 PSFRVFACQNPSHQG 1486
Score = 118 bits (295), Expect = 6e-25
Identities = 61/130 (46%), Positives = 88/130 (67%), Gaps = 1/130 (0%)
Frame = +2
Query: 8 RAMQLKK-PVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDAE 184
RA+ +K+ PVLL+G GKTSL+ + +GH VRIN E TD+ + LGS + DA
Sbjct: 581 RAVLIKRYPVLLQGPTSSGKTSLVQYLASITGHEFVRINNHEHTDLQEYLGSY--ITDAS 638
Query: 185 GMRFAWSDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCPT 364
G + +++G+L++A++NG W++LDELNLAP VLE LN +LD E+F+PEL +T K
Sbjct: 639 G-KLVFNEGVLVKAVRNGYWIVLDELNLAPSDVLEALNRLLDDNRELFVPELQETIKAHP 697
Query: 365 SFRVFACQNP 394
+F +F QNP
Sbjct: 698 NFMLFGTQNP 707
Score = 57.4 bits (137), Expect = 1e-06
Identities = 29/77 (37%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Frame = +2
Query: 179 AEGMRFAWSDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILD-HRAEVFIPELGQ--- 346
+ GM F++ +G + AL+NG+W+LLDE+NLAP L+ + +L+ + + E G
Sbjct: 337 SSGMLFSFVEGSFVTALRNGEWILLDEVNLAPPETLQRIIGVLEGENGALCLAERGDIDY 396
Query: 347 TYKCPTSFRVFACQNPS 397
++ P +FR+FAC NP+
Sbjct: 397 IHRHP-NFRIFACMNPA 412
>gb|EEE51075.1| hypothetical protein OsJ_31772 [Oryza sativa Japonica Group]
Length = 5128
Score = 240 bits (612), Expect = 1e-61
Identities = 119/135 (88%), Positives = 123/135 (91%)
Frame = +2
Query: 2 VLRAMQLKKPVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDA 181
VLR MQL KP+LLEGSPGVGKTSLIVA+ +SGH VVRINLSEQTD+MDLLGSDLPVE
Sbjct: 1594 VLRGMQLPKPLLLEGSPGVGKTSLIVALAGFSGHNVVRINLSEQTDMMDLLGSDLPVEGE 1653
Query: 182 EGMRFAWSDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCP 361
GM FAWSDGILLQALKNG WVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCP
Sbjct: 1654 NGMEFAWSDGILLQALKNGSWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCP 1713
Query: 362 TSFRVFACQNPSCQG 406
SFRVFACQNPS QG
Sbjct: 1714 PSFRVFACQNPSSQG 1728
Score = 110 bits (275), Expect = 1e-22
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 1/129 (0%)
Frame = +2
Query: 11 AMQLKK-PVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDAEG 187
A+ +KK PVLL+G GKTSL+ + +GH VRIN E TD+ + LG+ V D+ G
Sbjct: 882 AVYIKKYPVLLQGPTSSGKTSLVRFLAAQTGHEFVRINNHEHTDLQEYLGTY--VTDSHG 939
Query: 188 MRFAWSDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCPTS 367
+ + +G L++A++ G W++LDELNLAP VLE LN +LD E+F+PEL +T +
Sbjct: 940 -KLQFQEGALVKAVREGHWIVLDELNLAPSDVLEALNRLLDDNRELFVPELQETIPAHPN 998
Query: 368 FRVFACQNP 394
F +FA QNP
Sbjct: 999 FMLFATQNP 1007
Score = 58.9 bits (141), Expect = 4e-07
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Frame = +2
Query: 185 GMRFAWSDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILD-HRAEVFIPELG-----Q 346
GM F + +G + AL+NG W+LLDE+NLAP L+ + A+LD + + E G +
Sbjct: 630 GMSFQFVEGAFVSALRNGHWILLDEVNLAPPETLQRIGAVLDGESGTLCLAERGDVDYIE 689
Query: 347 TYKCPTSFRVFACQNPS 397
+ C FR+FAC NP+
Sbjct: 690 RHPC---FRMFACMNPA 703
Score = 56.2 bits (134), Expect = 3e-06
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Frame = +2
Query: 194 FAWSDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELG----QTYKCP 361
F W DG L+QA+KNGD L+DE++LA SVLE LN++L+ ++ + E G +
Sbjct: 1326 FLWQDGSLVQAMKNGDLFLIDEISLADDSVLERLNSVLEPERKLSLAEKGGSVLEKVVAH 1385
Query: 362 TSFRVFACQNP 394
+F + A NP
Sbjct: 1386 PNFFILATMNP 1396