BLASTX nr result

ID: Coptis23_contig00036334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036334
         (838 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...   100   4e-32
ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-31
ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-31
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    97   9e-29
ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...   100   3e-27

>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
            predicted protein [Populus trichocarpa]
          Length = 809

 Score =  100 bits (249), Expect(2) = 4e-32
 Identities = 51/144 (35%), Positives = 83/144 (57%), Gaps = 1/144 (0%)
 Frame = +3

Query: 3    NYDSDPSGRIWICWDSNYLEVKKMAESKQHIHVTM*LLSSAQVFELSMIYASNDSNERKA 182
            NYD    GRIW+CW+++ ++V     S Q IHV++ +L++   F  S+IY  N+++ R+A
Sbjct: 584  NYDFSCRGRIWVCWNADTVKVDVYGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREA 643

Query: 183  LW-NILKEMQNCTSKPWCLMGDFNNVLYTNERLGCDTGHPKEVEDFRDCVVSVGLSDMKF 359
            LW +I+       S PW LMGDFN +   ++RLG  T     ++    C+    + D+++
Sbjct: 644  LWSDIVSRSDGWESTPWILMGDFNAIRNQSDRLGGSTTWAGTMDRLDTCIREAKVDDLRY 703

Query: 360  TGFFYTWSNNAQGVHRKMSKIDRL 431
            +G  YTWSN     +  M K+DR+
Sbjct: 704  SGMHYTWSNQCP-ENLIMRKLDRV 726



 Score = 64.3 bits (155), Expect(2) = 4e-32
 Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
 Frame = +1

Query: 433 VLVNATWNNSF-LSEASFTPLGISDHSLMMVNWY-DSKKVHLPFIFCNIWFLHPNFHEVL 606
           VLVN  WN  F LSEA F P G+SDHS M+V    + + +  PF F ++W  H  F  ++
Sbjct: 726 VLVNEKWNLKFPLSEARFLPSGMSDHSPMVVKVIGNDQNIKKPFRFFDMWMDHDEFMPLV 785

Query: 607 TSVWDKQFYGTPIFILYSKLAELK 678
             VWD+   G P++ L  KL +LK
Sbjct: 786 KKVWDQNSGGCPMYQLCCKLRKLK 809


>ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|222832345|gb|EEE70822.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score = 97.1 bits (240), Expect(2) = 2e-31
 Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 1/144 (0%)
 Frame = +3

Query: 3   NYDSDPSGRIWICWDSNYLEVKKMAESKQHIHVTM*LLSSAQVFELSMIYASNDSNERKA 182
           NYD    GRIW+CW+++ ++V     S Q IHV++ +L++   F  S+IY  N+++ R+A
Sbjct: 60  NYDFSCRGRIWVCWNADTVKVDVFGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREA 119

Query: 183 LW-NILKEMQNCTSKPWCLMGDFNNVLYTNERLGCDTGHPKEVEDFRDCVVSVGLSDMKF 359
           LW +I+       S PW LMGDFN +   +++LG  T     +     C+    + D+ +
Sbjct: 120 LWSDIVSRSDGWESTPWILMGDFNAIRNQSDKLGGSTTWAGTMHRLDTCIREAKVDDLWY 179

Query: 360 TGFFYTWSNNAQGVHRKMSKIDRL 431
           +G  YTWSN     +  M K+DR+
Sbjct: 180 SGMHYTWSNQCP-ENLIMRKLDRV 202



 Score = 65.9 bits (159), Expect(2) = 2e-31
 Identities = 37/88 (42%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
 Frame = +1

Query: 433 VLVNATWNNSF-LSEASFTPLGISDHSLMMVNWY-DSKKVHLPFIFCNIWFLHPNFHEVL 606
           VLVN  WN +F LSEA F P G+SDHS M+V    + + +  PF F ++W  H  F  ++
Sbjct: 202 VLVNEKWNLNFPLSEARFLPSGMSDHSPMVVKVIGNDQNIKKPFRFFDMWMDHDEFMPLV 261

Query: 607 TSVWDKQFYGTPIFILYSKLAELKKTLK 690
             VWD+   G P++ L  KL + K+ LK
Sbjct: 262 KKVWDQNSGGCPMYQLCCKLRKQKQELK 289


>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
           predicted protein [Populus trichocarpa]
          Length = 819

 Score = 95.5 bits (236), Expect(2) = 2e-31
 Identities = 49/144 (34%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
 Frame = +3

Query: 3   NYDSDPSGRIWICWDSNYLEVKKMAESKQHIHVTM*LLSSAQVFELSMIYASNDSNERKA 182
           NYD    GRIW+CW+++ ++V     S Q IHV++ +L++   F  S+IY  N+++ R+A
Sbjct: 437 NYDFSCRGRIWVCWNADTVKVDVFGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREA 496

Query: 183 LW-NILKEMQNCTSKPWCLMGDFNNVLYTNERLGCDTGHPKEVEDFRDCVVSVGLSDMKF 359
           LW +I+       S  W L+GDFN +   ++RLG  T     ++    C+    + D+++
Sbjct: 497 LWSDIVSRSDGWESTLWILIGDFNAIRNQSDRLGGSTTWAGTMDRLDTCIREAKVDDLRY 556

Query: 360 TGFFYTWSNNAQGVHRKMSKIDRL 431
           +G  YTWSN     +  M K+DR+
Sbjct: 557 SGMHYTWSNQCP-ENLIMRKLDRV 579



 Score = 67.0 bits (162), Expect(2) = 2e-31
 Identities = 41/91 (45%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
 Frame = +1

Query: 433 VLVNATWNNSF-LSEASFTPLGISDHSLMMV----NWYDSKKVHLPFIFCNIWFLHPNFH 597
           VLVN  WN  F LSEA F P G+SDHS M+V    N  + KK   PF F ++W  H  F 
Sbjct: 579 VLVNEKWNLKFPLSEARFLPSGMSDHSPMVVKVIGNDQNKKK---PFRFFDMWMDHDEFM 635

Query: 598 EVLTSVWDKQFYGTPIFILYSKLAELKKTLK 690
            ++  VWD+   G P++ L  KL +LK+ LK
Sbjct: 636 PLVKKVWDQNSRGCPMYQLCCKLRKLKQELK 666


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
           predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 96.7 bits (239), Expect(2) = 9e-29
 Identities = 46/129 (35%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
 Frame = +3

Query: 3   NYDSDPSGRIWICWDSNYLEVKKMAESKQHIHVTM*LLSSAQVFELSMIYASNDSNERKA 182
           NYD    GRIW+CW+++ ++V     S + IHV++ +L++   F  S+IY  N+++ R+A
Sbjct: 514 NYDFSCRGRIWVCWNADTVKVDVFGMSDEAIHVSVTILATNISFNTSIIYGDNNASLREA 573

Query: 183 LW-NILKEMQNCTSKPWCLMGDFNNVLYTNERLGCDTGHPKEVEDFRDCVVSVGLSDMKF 359
           LW +I+       S PW LMGDFN +   + RLG  T     ++    C+    + D+++
Sbjct: 574 LWSDIVSRSDGWESTPWILMGDFNAIRNQSGRLGGSTTWAGTMDRLDTCIREAKVDDLRY 633

Query: 360 TGFFYTWSN 386
           +G  YTWSN
Sbjct: 634 SGMHYTWSN 642



 Score = 57.0 bits (136), Expect(2) = 9e-29
 Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
 Frame = +1

Query: 433 VLVNATWNNSF-LSEASFTPLGISDHSLMMVNWY-DSKKVHLPFIFCNIWFLHPNFHEVL 606
           VLVN  WN +F LS+A F P G+SDHS M+V    + + +  PF F ++W  H  F  ++
Sbjct: 656 VLVNEKWNLNFPLSKARFLPSGMSDHSPMVVKVIGNDQNIKKPFRFFDMWMDHDEFMPLV 715

Query: 607 TSVWDKQFYGTPI 645
             VWD+   G PI
Sbjct: 716 KKVWDQNSGGCPI 728


>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score =  100 bits (249), Expect(2) = 3e-27
 Identities = 51/144 (35%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
 Frame = +3

Query: 3   NYDSDPSGRIWICWDSNYLEVKKMAESKQHIHVTM*LLSSAQVFELSMIYASNDSNERKA 182
           NYD    GRIW+CW+++ ++V     S Q IHV++ +L++   F  S+IY  N+++ R+A
Sbjct: 44  NYDFSCRGRIWVCWNADTVKVNVFGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREA 103

Query: 183 LW-NILKEMQNCTSKPWCLMGDFNNVLYTNERLGCDTGHPKEVEDFRDCVVSVGLSDMKF 359
           LW +I+       S PW LMGDFN +   + RLG  T     ++    C+    + D+++
Sbjct: 104 LWSDIVSRSDGWESTPWILMGDFNAIRNQSHRLGGSTTWAGTMDRLDTCIREAKVDDLRY 163

Query: 360 TGFFYTWSNNAQGVHRKMSKIDRL 431
           +G  YTWSN     +  M K+DR+
Sbjct: 164 SGMHYTWSNQCP-ENLIMRKLDRV 186



 Score = 48.1 bits (113), Expect(2) = 3e-27
 Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
 Frame = +1

Query: 433 VLVNATWNNSF-LSEASFTPLGISDHSLMMVNWY-DSKKVHLPFIFCNIWFLHPNFHEVL 606
           VLVN  WN +F LSE  F P GISDHS M+V    + + +  PF F ++W          
Sbjct: 186 VLVNEKWNLNFPLSEVRFLPSGISDHSPMVVKVIGNDQNIKKPFRFFDMWM--------- 236

Query: 607 TSVWDKQFYGTPIFILYSKLAELKKTLK 690
               D+   G P++ L   L +LK+ LK
Sbjct: 237 ----DQNSGGCPMYQLCCNLKKLKQELK 260


Top