BLASTX nr result

ID: Coptis23_contig00036323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036323
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ53180.1| JHL18I08.14 [Jatropha curcas]                         114   1e-23
gb|ABL63114.1| DNA-binding protein [Catharanthus roseus]              106   2e-21
emb|CBI19787.3| unnamed protein product [Vitis vinifera]              104   8e-21
ref|XP_002280777.1| PREDICTED: uncharacterized protein LOC100260...   104   8e-21
ref|XP_002510471.1| transcription factor, putative [Ricinus comm...   103   1e-20

>dbj|BAJ53180.1| JHL18I08.14 [Jatropha curcas]
          Length = 315

 Score =  114 bits (284), Expect = 1e-23
 Identities = 64/123 (52%), Positives = 73/123 (59%)
 Frame = +3

Query: 27  TTTSGLEVGHHFPAEVSSAAVFRCVRVSAMDDAEEQYAYQTAVNIGGHVFKGILYDQGVD 206
           TTTSGLEV H FP EV+S AVFRCV+VSAMDDA+EQ+AYQTAVNIGGH+F+G+LYDQG D
Sbjct: 191 TTTSGLEVAH-FPPEVNSPAVFRCVKVSAMDDADEQFAYQTAVNIGGHMFRGLLYDQGPD 249

Query: 207 XXXXXXXXXXXXXXXXXXXXXXQNHNLIXXXXXXXXXXXXXXXXXPLFVDPSSLYPTPLN 386
                                 Q  NLI                    +DPSSLYP PLN
Sbjct: 250 --------SRYTSGGESSSGGAQQLNLITAATTSTEATPSNQQGTGALIDPSSLYPAPLN 301

Query: 387 AFV 395
           AF+
Sbjct: 302 AFI 304


>gb|ABL63114.1| DNA-binding protein [Catharanthus roseus]
          Length = 367

 Score =  106 bits (265), Expect = 2e-21
 Identities = 61/77 (79%), Positives = 65/77 (84%), Gaps = 9/77 (11%)
 Frame = +3

Query: 3   RPREN---LHCT----TTSGLE-VGHHFPAEVSSAAVFRCVRVSAMDDAEEQ-YAYQTAV 155
           RPREN   L CT    ++SGLE VG  FPAEVSSAAVFRCVRVSAMD+AEEQ YAYQTAV
Sbjct: 205 RPRENPSSLACTRLPTSSSGLEMVGGQFPAEVSSAAVFRCVRVSAMDEAEEQQYAYQTAV 264

Query: 156 NIGGHVFKGILYDQGVD 206
           NIGGHVFKGILYDQG+D
Sbjct: 265 NIGGHVFKGILYDQGLD 281


>emb|CBI19787.3| unnamed protein product [Vitis vinifera]
          Length = 289

 Score =  104 bits (259), Expect = 8e-21
 Identities = 68/135 (50%), Positives = 75/135 (55%), Gaps = 4/135 (2%)
 Frame = +3

Query: 3   RPREN----LHCTTTSGLEVGHHFPAEVSSAAVFRCVRVSAMDDAEEQYAYQTAVNIGGH 170
           R REN       TTTSGLEVGH FP+EV+S A FRCVRVSAMD+A+EQ AYQTAVNIGGH
Sbjct: 157 RQRENPVAPALATTTSGLEVGH-FPSEVNSPAYFRCVRVSAMDEADEQLAYQTAVNIGGH 215

Query: 171 VFKGILYDQGVDXXXXXXXXXXXXXXXXXXXXXXQNHNLIXXXXXXXXXXXXXXXXXPLF 350
           VFKGILYD G +                      Q HNLI                    
Sbjct: 216 VFKGILYDHGPE-------SRYGGESSSGGGSGSQQHNLI----TAPPGVTTTSNQATTL 264

Query: 351 VDPSSLYPTPLNAFV 395
           +DP SLYP PLN F+
Sbjct: 265 LDP-SLYPAPLNVFM 278


>ref|XP_002280777.1| PREDICTED: uncharacterized protein LOC100260953 [Vitis vinifera]
          Length = 320

 Score =  104 bits (259), Expect = 8e-21
 Identities = 68/135 (50%), Positives = 75/135 (55%), Gaps = 4/135 (2%)
 Frame = +3

Query: 3   RPREN----LHCTTTSGLEVGHHFPAEVSSAAVFRCVRVSAMDDAEEQYAYQTAVNIGGH 170
           R REN       TTTSGLEVGH FP+EV+S A FRCVRVSAMD+A+EQ AYQTAVNIGGH
Sbjct: 188 RQRENPVAPALATTTSGLEVGH-FPSEVNSPAYFRCVRVSAMDEADEQLAYQTAVNIGGH 246

Query: 171 VFKGILYDQGVDXXXXXXXXXXXXXXXXXXXXXXQNHNLIXXXXXXXXXXXXXXXXXPLF 350
           VFKGILYD G +                      Q HNLI                    
Sbjct: 247 VFKGILYDHGPE-------SRYGGESSSGGGSGSQQHNLI----TAPPGVTTTSNQATTL 295

Query: 351 VDPSSLYPTPLNAFV 395
           +DP SLYP PLN F+
Sbjct: 296 LDP-SLYPAPLNVFM 309


>ref|XP_002510471.1| transcription factor, putative [Ricinus communis]
           gi|223551172|gb|EEF52658.1| transcription factor,
           putative [Ricinus communis]
          Length = 311

 Score =  103 bits (257), Expect = 1e-20
 Identities = 51/60 (85%), Positives = 54/60 (90%)
 Frame = +3

Query: 27  TTTSGLEVGHHFPAEVSSAAVFRCVRVSAMDDAEEQYAYQTAVNIGGHVFKGILYDQGVD 206
           TTTSGLEV H FP EV+S AVFRCVRVS M+D +EQYAYQTAVNIGGHVFKGILYDQGVD
Sbjct: 187 TTTSGLEVSH-FPPEVNSPAVFRCVRVSPMEDTDEQYAYQTAVNIGGHVFKGILYDQGVD 245


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