BLASTX nr result

ID: Coptis23_contig00036313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036313
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169660.1| PREDICTED: beta-amylase 1, chloroplastic-lik...   108   5e-22
ref|XP_004144400.1| PREDICTED: beta-amylase 1, chloroplastic-lik...   108   5e-22
gb|AFQ33615.1| beta-amylase 3 [Citrus trifoliata]                     107   1e-21
emb|CAN65860.1| hypothetical protein VITISV_014849 [Vitis vinifera]   106   2e-21
ref|XP_002297961.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-21

>ref|XP_004169660.1| PREDICTED: beta-amylase 1, chloroplastic-like [Cucumis sativus]
          Length = 395

 Score =  108 bits (270), Expect = 5e-22
 Identities = 48/64 (75%), Positives = 58/64 (90%)
 Frame = -1

Query: 194 EQPDLAFSDRFGRRNGEYISLGCDVLPVLKGRSPMQAYSDFMRSFRDTFQEHLGITVTGI 15
           + PDLA+SDRFGRRN EYI+LGCD LPVL+GRSP+QAY+DFMR+FRDTF+ +LG  +TGI
Sbjct: 36  KDPDLAYSDRFGRRNSEYITLGCDTLPVLRGRSPIQAYADFMRNFRDTFRPYLGAIITGI 95

Query: 14  QVGM 3
           QVGM
Sbjct: 96  QVGM 99


>ref|XP_004144400.1| PREDICTED: beta-amylase 1, chloroplastic-like [Cucumis sativus]
          Length = 546

 Score =  108 bits (270), Expect = 5e-22
 Identities = 48/64 (75%), Positives = 58/64 (90%)
 Frame = -1

Query: 194 EQPDLAFSDRFGRRNGEYISLGCDVLPVLKGRSPMQAYSDFMRSFRDTFQEHLGITVTGI 15
           + PDLA+SDRFGRRN EYI+LGCD LPVL+GRSP+QAY+DFMR+FRDTF+ +LG  +TGI
Sbjct: 187 KDPDLAYSDRFGRRNSEYITLGCDTLPVLRGRSPIQAYADFMRNFRDTFRPYLGAIITGI 246

Query: 14  QVGM 3
           QVGM
Sbjct: 247 QVGM 250


>gb|AFQ33615.1| beta-amylase 3 [Citrus trifoliata]
          Length = 541

 Score =  107 bits (267), Expect = 1e-21
 Identities = 48/64 (75%), Positives = 58/64 (90%)
 Frame = -1

Query: 194 EQPDLAFSDRFGRRNGEYISLGCDVLPVLKGRSPMQAYSDFMRSFRDTFQEHLGITVTGI 15
           + PDLA+SDRFGRRN EYISLGCD+LPVL+GRSP+QAY+DFMR+FRDTF+  LG  +TG+
Sbjct: 181 KDPDLAYSDRFGRRNMEYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRPLLGAIITGV 240

Query: 14  QVGM 3
           QVGM
Sbjct: 241 QVGM 244


>emb|CAN65860.1| hypothetical protein VITISV_014849 [Vitis vinifera]
          Length = 542

 Score =  106 bits (264), Expect = 2e-21
 Identities = 49/66 (74%), Positives = 56/66 (84%)
 Frame = -1

Query: 200 MIEQPDLAFSDRFGRRNGEYISLGCDVLPVLKGRSPMQAYSDFMRSFRDTFQEHLGITVT 21
           M   PDLAFSDRFG RN EYISLGCD+LPVL+GRSP+Q Y DFMR+FRDTF+  LG+T+T
Sbjct: 189 MDRDPDLAFSDRFGTRNXEYISLGCDILPVLRGRSPIQTYXDFMRNFRDTFKPFLGLTIT 248

Query: 20  GIQVGM 3
            IQVGM
Sbjct: 249 VIQVGM 254


>ref|XP_002297961.1| predicted protein [Populus trichocarpa] gi|222845219|gb|EEE82766.1|
           predicted protein [Populus trichocarpa]
          Length = 555

 Score =  105 bits (263), Expect = 3e-21
 Identities = 46/64 (71%), Positives = 57/64 (89%)
 Frame = -1

Query: 194 EQPDLAFSDRFGRRNGEYISLGCDVLPVLKGRSPMQAYSDFMRSFRDTFQEHLGITVTGI 15
           + PD+A++DRFGRRN EYISLGCD+ PVLKGRSP+QAYSDFM +FRDTF+  LG+ +TG+
Sbjct: 195 KDPDIAYTDRFGRRNMEYISLGCDMFPVLKGRSPLQAYSDFMMNFRDTFRSLLGVVITGV 254

Query: 14  QVGM 3
           QVGM
Sbjct: 255 QVGM 258


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