BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036300
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273989.2| PREDICTED: pentatricopeptide repeat-containi...   124   8e-27
emb|CBI32643.3| unnamed protein product [Vitis vinifera]              124   8e-27
ref|XP_002323442.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_003624377.1| Pentatricopeptide repeat-containing protein ...   115   4e-24
ref|XP_003550640.1| PREDICTED: pentatricopeptide repeat-containi...   114   1e-23

>ref|XP_002273989.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37320-like [Vitis vinifera]
          Length = 510

 Score =  124 bits (311), Expect = 8e-27
 Identities = 66/94 (70%), Positives = 71/94 (75%), Gaps = 3/94 (3%)
 Frame = -1

Query: 276 DASTLSCALS---SIRCLEQGVQLHCLAMKSGFYVYVYVGSSLTSFYGKCGHLNEAYRVF 106
           DAS LS ALS   S R L+ GVQ HCLA+++GF   VYVGS L SFY KCG L  AYRVF
Sbjct: 112 DASALSHALSLCASSRSLKSGVQFHCLAIRTGFVGNVYVGSCLISFYSKCGELCHAYRVF 171

Query: 105 EEIPVKNVVSWTAIIAGFAQNWDVDMCLMLYYRM 4
           EE+PVKNVVSWTAIIAGFAQ W VD CL LY RM
Sbjct: 172 EEMPVKNVVSWTAIIAGFAQEWLVDGCLELYSRM 205



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
 Frame = -1

Query: 267 TLSCALSSIR---CLEQGVQLHCLAMKSGFYVYVYVGSSLTSFYGKCGHLNEAYRVFEEI 97
           T +C LS+      L +G   HC  ++ GF  YV+V ++L S Y KCG++ +AY +FE +
Sbjct: 216 TFTCLLSTCTGGGSLGRGRSAHCQTIEMGFDSYVHVANALISMYCKCGNVEDAYYIFERM 275

Query: 96  PVKNVVSWTAIIAGFAQN 43
             K++VSW ++IAG AQ+
Sbjct: 276 DGKDIVSWNSMIAGHAQH 293


>emb|CBI32643.3| unnamed protein product [Vitis vinifera]
          Length = 1400

 Score =  124 bits (311), Expect = 8e-27
 Identities = 66/94 (70%), Positives = 71/94 (75%), Gaps = 3/94 (3%)
 Frame = -1

Query: 276  DASTLSCALS---SIRCLEQGVQLHCLAMKSGFYVYVYVGSSLTSFYGKCGHLNEAYRVF 106
            DAS LS ALS   S R L+ GVQ HCLA+++GF   VYVGS L SFY KCG L  AYRVF
Sbjct: 973  DASALSHALSLCASSRSLKSGVQFHCLAIRTGFVGNVYVGSCLISFYSKCGELCHAYRVF 1032

Query: 105  EEIPVKNVVSWTAIIAGFAQNWDVDMCLMLYYRM 4
            EE+PVKNVVSWTAIIAGFAQ W VD CL LY RM
Sbjct: 1033 EEMPVKNVVSWTAIIAGFAQEWLVDGCLELYSRM 1066



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
 Frame = -1

Query: 267  TLSCALSSIR---CLEQGVQLHCLAMKSGFYVYVYVGSSLTSFYGKCGHLNEAYRVFEEI 97
            T +C LS+      L +G   HC  ++ GF  YV+V ++L S Y KCG++ +AY +FE +
Sbjct: 1077 TFTCLLSTCTGGGSLGRGRSAHCQTIEMGFDSYVHVANALISMYCKCGNVEDAYYIFERM 1136

Query: 96   PVKNVVSWTAIIAGFAQN 43
              K++VSW ++IAG AQ+
Sbjct: 1137 DGKDIVSWNSMIAGHAQH 1154


>ref|XP_002323442.1| predicted protein [Populus trichocarpa] gi|222868072|gb|EEF05203.1|
           predicted protein [Populus trichocarpa]
          Length = 526

 Score =  124 bits (310), Expect = 1e-26
 Identities = 60/97 (61%), Positives = 74/97 (76%), Gaps = 3/97 (3%)
 Frame = -1

Query: 285 MSADASTLSCALSSI---RCLEQGVQLHCLAMKSGFYVYVYVGSSLTSFYGKCGHLNEAY 115
           +S DAS LS A+SS    R L  G+Q HCLA+ +GF    Y+GSSL +FYGKCG L+ AY
Sbjct: 124 LSFDASVLSNAVSSCASTRDLRGGIQYHCLAISAGFIANAYIGSSLVTFYGKCGELDNAY 183

Query: 114 RVFEEIPVKNVVSWTAIIAGFAQNWDVDMCLMLYYRM 4
           +VF+E+PV+NVVSWTAII+GFAQ+W VDMCL LY  M
Sbjct: 184 KVFKEMPVRNVVSWTAIISGFAQDWQVDMCLQLYCLM 220



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/89 (34%), Positives = 55/89 (61%)
 Frame = -1

Query: 270 STLSCALSSIRCLEQGVQLHCLAMKSGFYVYVYVGSSLTSFYGKCGHLNEAYRVFEEIPV 91
           ++L  A +    L QG   HC  ++ GF  Y+++ ++L S Y KCG++ +A+ +FE +  
Sbjct: 233 TSLLSACTGSGALGQGRSAHCQIIEMGFVSYLHIANALVSMYCKCGNVEDAFHIFENMVG 292

Query: 90  KNVVSWTAIIAGFAQNWDVDMCLMLYYRM 4
           K++VSW ++IAG+AQ+      + L+ RM
Sbjct: 293 KDIVSWNSMIAGYAQHGLAVQGIGLFERM 321


>ref|XP_003624377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499392|gb|AES80595.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 487

 Score =  115 bits (288), Expect = 4e-24
 Identities = 60/99 (60%), Positives = 70/99 (70%), Gaps = 3/99 (3%)
 Frame = -1

Query: 291 QGMSADASTLSCALS---SIRCLEQGVQLHCLAMKSGFYVYVYVGSSLTSFYGKCGHLNE 121
           QG+  D   LS ALS   S R    G+Q HCLA++ GF   VYVGSSL S Y +CG L +
Sbjct: 102 QGLGIDVCFLSHALSLCGSKRDFYGGIQYHCLAIRIGFIANVYVGSSLISLYSRCGLLGD 161

Query: 120 AYRVFEEIPVKNVVSWTAIIAGFAQNWDVDMCLMLYYRM 4
           AYRVF+E+ V+NVVSWTAIIAGFAQ W VDMCL L+ RM
Sbjct: 162 AYRVFDEMSVRNVVSWTAIIAGFAQEWRVDMCLELFRRM 200


>ref|XP_003550640.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37320-like [Glycine max]
          Length = 501

 Score =  114 bits (284), Expect = 1e-23
 Identities = 59/99 (59%), Positives = 69/99 (69%), Gaps = 3/99 (3%)
 Frame = -1

Query: 291 QGMSADASTLSCALSSI---RCLEQGVQLHCLAMKSGFYVYVYVGSSLTSFYGKCGHLNE 121
           QG   D   LS A+SS    R L  G+Q HCLA+ +GF   VYVGSSL S Y +C  L +
Sbjct: 101 QGFGVDVFFLSQAVSSCGSKRDLWGGIQYHCLAITTGFVASVYVGSSLISLYSRCAFLGD 160

Query: 120 AYRVFEEIPVKNVVSWTAIIAGFAQNWDVDMCLMLYYRM 4
           A RVFEE+PV+NVVSWTAIIAGFAQ W VDMCL L+ +M
Sbjct: 161 ACRVFEEMPVRNVVSWTAIIAGFAQEWHVDMCLELFQQM 199



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/89 (32%), Positives = 52/89 (58%)
 Frame = -1

Query: 270 STLSCALSSIRCLEQGVQLHCLAMKSGFYVYVYVGSSLTSFYGKCGHLNEAYRVFEEIPV 91
           S LS  + S   L  G   HC  ++ GF+ Y+++ ++L S Y KCG +++A  +FE +  
Sbjct: 213 SLLSACMGS-GALGHGRCAHCQIIRMGFHSYLHIENALISMYSKCGAIDDALHIFENMVS 271

Query: 90  KNVVSWTAIIAGFAQNWDVDMCLMLYYRM 4
           ++VV+W  +I+G+AQ+      + L+  M
Sbjct: 272 RDVVTWNTMISGYAQHGLAQEAINLFEEM 300