BLASTX nr result

ID: Coptis23_contig00036279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036279
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70896.1| hypothetical protein VITISV_012940 [Vitis vinifera]    79   3e-13
emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]    79   5e-13
emb|CAN69474.1| hypothetical protein VITISV_014375 [Vitis vinifera]    78   6e-13
emb|CAN67355.1| hypothetical protein VITISV_002170 [Vitis vinifera]    78   6e-13
emb|CAN80718.1| hypothetical protein VITISV_004147 [Vitis vinifera]    78   8e-13

>emb|CAN70896.1| hypothetical protein VITISV_012940 [Vitis vinifera]
          Length = 563

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
 Frame = -3

Query: 334 KALSKVKFFIWCTLWGQILTVDNLRKRGMIIPSRCVLCRLCEESIEHIFLFCPVSVQVWG 155
           K  +K+ FF W   WG++LT+D L++RG  +P+RC LC   EE+I HI + C V+  +W 
Sbjct: 405 KVPTKIAFFAWEATWGKVLTLDRLQRRGWHLPNRCFLCGCEEETINHILIHCTVAKGLWN 464

Query: 154 YLSHL-SISHV--TSVCELLKKWPKLPMSNGFADQLWCLLPYAIIWGLWNSRN 5
            +  L  +  V   SV E+L  W K         ++W  +P  I W +W  RN
Sbjct: 465 IILALCGVQWVFPNSVKEVLSSW-KGSFVGRKRKEVWKSIPLFIFWTIWKERN 516


>emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]
          Length = 3804

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
 Frame = -3

Query: 334  KALSKVKFFIWCTLWGQILTVDNLRKRGMIIPSRCVLCRLCEESIEHIFLFCPVSVQVWG 155
            K  +K+ FF W   WG++LT+D L++RG  +P+RC LC   EE+I HI + C V+  +W 
Sbjct: 1670 KVPTKIXFFAWEATWGKVLTLDRLQRRGWHLPNRCFLCGCEEETINHILIHCTVAKGLWD 1729

Query: 154  YLSHL-SISHV--TSVCELLKKWPKLPMSNGFADQLWCLLPYAIIWGLWNSRN 5
             +  L  +  V   SV E+L  W K         ++W  +P  I W +W  RN
Sbjct: 1730 IILALCGVQWVFPNSVKEVLSSW-KGSFVGRKRKKVWKSIPLFIFWTIWKERN 1781


>emb|CAN69474.1| hypothetical protein VITISV_014375 [Vitis vinifera]
          Length = 1383

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
 Frame = -3

Query: 334  KALSKVKFFIWCTLWGQILTVDNLRKRGMIIPSRCVLCRLCEESIEHIFLFCPVSVQVWG 155
            K  +K+ FF W   WG++LT+D L++RG  +P+RC LC   EE+I HI + C ++  +W 
Sbjct: 882  KVPTKIAFFAWEATWGKVLTLDRLQRRGWHLPNRCFLCGCEEETINHILIHCTMAKGLWN 941

Query: 154  YLSHL-SISHV--TSVCELLKKWPKLPMSNGFADQLWCLLPYAIIWGLWNSRN 5
             +  L  +  V   SV E+L  W K         ++W  +P  I W +W  RN
Sbjct: 942  IILALCGVQWVFPNSVKEVLSSW-KGSFVGRKRKEVWKSIPLFIFWTIWKERN 993


>emb|CAN67355.1| hypothetical protein VITISV_002170 [Vitis vinifera]
          Length = 1385

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
 Frame = -3

Query: 325  SKVKFFIWCTLWGQILTVDNLRKRGMIIPSRCVLCRLCEESIEHIFLFCPVSVQVWG-YL 149
            SK+ FF W   WG+ILT+D L+KRG  +P+ C LC + EE++ H+ L C V+  +WG  L
Sbjct: 1269 SKLAFFAWEATWGRILTLDRLQKRGWQLPNCCYLCGMDEENVNHLLLHCTVARVLWGIVL 1328

Query: 148  SHLSISHV--TSVCELLKKWPKLPMSNGFADQLWCLLPYAIIWGLWNSRN 5
              + +  V   +V E++  W K        +++W  +P  I W +W  RN
Sbjct: 1329 GLVGVQWVFPETVKEVIVSW-KGSFVGKKREKIWRSIPLFIFWTVWKERN 1377


>emb|CAN80718.1| hypothetical protein VITISV_004147 [Vitis vinifera]
          Length = 403

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
 Frame = -3

Query: 334 KALSKVKFFIWCTLWGQILTVDNLRKRGMIIPSRCVLCRLCEESIEHIFLFCPVSVQVWG 155
           K  +K+ FF W   WG++LT+D L++RG  +P+RC LC   EE+I HI + C V+  +W 
Sbjct: 245 KVPTKIIFFAWEATWGKVLTLDRLQRRGWHLPNRCFLCGCEEETINHILIHCTVAKGLWD 304

Query: 154 YLSHL-SISHV--TSVCELLKKWPKLPMSNGFADQLWCLLPYAIIWGLWNSRN 5
            +  L  +  V   SV E+L  W K         ++W  +P  I W +W  RN
Sbjct: 305 IILALCGVQWVLPNSVKEVLSSW-KGSFVGRKRKKVWKSIPLFIFWTIWKERN 356


Top