BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036261
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20904.3| unnamed protein product [Vitis vinifera]              253   1e-65
ref|XP_002324822.1| predicted protein [Populus trichocarpa] gi|2...   250   9e-65
ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycin...   247   8e-64
ref|XP_003588560.1| DNA polymerase I family protein expressed [M...   243   1e-62
ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis th...   238   3e-61

>emb|CBI20904.3| unnamed protein product [Vitis vinifera]
          Length = 2091

 Score =  253 bits (646), Expect = 1e-65
 Identities = 120/152 (78%), Positives = 134/152 (88%)
 Frame = +2

Query: 2    LPIPEGQTKGKQHPSTDKHSLDLLRHQHPIVNIIKEHRTLAKLLNSTLGSICSQARLSMS 181
            LPIPEG  KGKQHPSTDKH LDLLRH+HPI+ +IKEHRTLAKLLN TLGSICS ARLS+ 
Sbjct: 1699 LPIPEGHNKGKQHPSTDKHCLDLLRHEHPIIPVIKEHRTLAKLLNCTLGSICSLARLSLQ 1758

Query: 182  TQRYTLHGHWLQTSTATGRLSMEEPNLQCVEHTVNFKFNSIDENQNSSDADHHVVNARKF 361
            TQRYTLHGHWLQTSTATGRLSMEEPNLQCVEH V FK    +++  +S+ADH+ +NAR F
Sbjct: 1759 TQRYTLHGHWLQTSTATGRLSMEEPNLQCVEHVVEFKMIKGNKDVCNSEADHYKINARDF 1818

Query: 362  FIPTQENWLLLTADYSQIELRLMAHFSKDSPL 457
            F+P+QENWLLLTADYSQIELRLMAHFS+DS L
Sbjct: 1819 FVPSQENWLLLTADYSQIELRLMAHFSRDSSL 1850


>ref|XP_002324822.1| predicted protein [Populus trichocarpa] gi|222866256|gb|EEF03387.1|
           predicted protein [Populus trichocarpa]
          Length = 646

 Score =  250 bits (638), Expect = 9e-65
 Identities = 118/153 (77%), Positives = 137/153 (89%)
 Frame = +2

Query: 2   LPIPEGQTKGKQHPSTDKHSLDLLRHQHPIVNIIKEHRTLAKLLNSTLGSICSQARLSMS 181
           LPIPEG  KGK+HPSTDKH LDLLRH+HPIV +I+EHRTLAKLLNSTLGSICS ARLSM 
Sbjct: 257 LPIPEGHNKGKKHPSTDKHCLDLLRHEHPIVPVIREHRTLAKLLNSTLGSICSLARLSME 316

Query: 182 TQRYTLHGHWLQTSTATGRLSMEEPNLQCVEHTVNFKFNSIDENQNSSDADHHVVNARKF 361
           TQ+YTLHGHWLQTSTATGRLS+EEPNLQCVEH V+F+ +S D+  + ++ +H+ +NAR F
Sbjct: 317 TQKYTLHGHWLQTSTATGRLSIEEPNLQCVEHAVDFEMSS-DKEGDDAEPEHYKINARDF 375

Query: 362 FIPTQENWLLLTADYSQIELRLMAHFSKDSPLI 460
           F+PTQ+NWLLLTADYSQIELRLMAHFSKD+ LI
Sbjct: 376 FVPTQDNWLLLTADYSQIELRLMAHFSKDTALI 408


>ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycine max]
          Length = 2147

 Score =  247 bits (630), Expect = 8e-64
 Identities = 118/153 (77%), Positives = 132/153 (86%)
 Frame = +2

Query: 2    LPIPEGQTKGKQHPSTDKHSLDLLRHQHPIVNIIKEHRTLAKLLNSTLGSICSQARLSMS 181
            LPIP+ + KGKQHPST KH LD LRH+HPIV +IKEHRT+AKLLNSTLGSICS ARLS+S
Sbjct: 1759 LPIPDVRNKGKQHPSTSKHCLDALRHEHPIVPVIKEHRTMAKLLNSTLGSICSLARLSVS 1818

Query: 182  TQRYTLHGHWLQTSTATGRLSMEEPNLQCVEHTVNFKFNSIDENQNSSDADHHVVNARKF 361
            TQ+YTLHGHWLQTSTATGRLSMEEPNLQCVEH V FK    DEN+  +D  +  +NAR F
Sbjct: 1819 TQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHAVEFKMK--DENEGDADESYCTINARDF 1876

Query: 362  FIPTQENWLLLTADYSQIELRLMAHFSKDSPLI 460
            F+PTQ+NWLLLTADYSQIELRLMAHFSKDS L+
Sbjct: 1877 FVPTQDNWLLLTADYSQIELRLMAHFSKDSSLV 1909


>ref|XP_003588560.1| DNA polymerase I family protein expressed [Medicago truncatula]
            gi|355477608|gb|AES58811.1| DNA polymerase I family
            protein expressed [Medicago truncatula]
          Length = 2269

 Score =  243 bits (620), Expect = 1e-62
 Identities = 121/154 (78%), Positives = 133/154 (86%), Gaps = 1/154 (0%)
 Frame = +2

Query: 2    LPIPEGQTKGKQHPSTDKHSLDLLRHQHPIVNIIKEHRTLAKLLNSTLGSICSQARLSMS 181
            LPIP+G+ KGK HPST KH LD LR++HPIV IIKEHRTLAKLLNSTLGSICS ARLS+S
Sbjct: 1837 LPIPDGKNKGKNHPSTGKHCLDALRNEHPIVPIIKEHRTLAKLLNSTLGSICSLARLSVS 1896

Query: 182  TQRYTLHGHWLQTSTATGRLSMEEPNLQCVEHTVNFKFNSIDENQNSSDADHHV-VNARK 358
            TQ+YTLHGHWLQTSTATGRLSMEEPNLQCVEH V+FK N    ++N  DAD    VNAR 
Sbjct: 1897 TQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHAVDFKMNG---DKNEGDADESCRVNARD 1953

Query: 359  FFIPTQENWLLLTADYSQIELRLMAHFSKDSPLI 460
            +F+PTQ+NWLLLTADYSQIELRLMAHFSKDS LI
Sbjct: 1954 YFVPTQDNWLLLTADYSQIELRLMAHFSKDSTLI 1987


>ref|NP_001078482.1| DNA polymerase theta subunit [Arabidopsis thaliana]
            gi|62241195|dbj|BAD93700.1| helicase and polymerase
            containing protein TEBICHI [Arabidopsis thaliana]
            gi|332660705|gb|AEE86105.1| DNA polymerase theta subunit
            [Arabidopsis thaliana]
          Length = 2154

 Score =  238 bits (608), Expect = 3e-61
 Identities = 120/155 (77%), Positives = 133/155 (85%), Gaps = 2/155 (1%)
 Frame = +2

Query: 2    LPIPEGQTKGKQHPSTDKHSLDLLRHQHPIVNIIKEHRTLAKLLNSTLGSICSQARLSMS 181
            LPIPE Q+KGK HPSTDKH LDLLR++HP+V IIKEHRTLAKLLN TLGSICS A+L +S
Sbjct: 1776 LPIPENQSKGKLHPSTDKHCLDLLRNEHPVVPIIKEHRTLAKLLNCTLGSICSLAKLRLS 1835

Query: 182  TQRYTLHGHWLQTSTATGRLSMEEPNLQCVEHTVNFKFNSIDENQN--SSDADHHVVNAR 355
            TQRYTLHG WLQTSTATGRLS+EEPNLQ VEH V FK   +D+N    SSDAD + +NAR
Sbjct: 1836 TQRYTLHGRWLQTSTATGRLSIEEPNLQSVEHEVEFK---LDKNGRDVSSDADRYKINAR 1892

Query: 356  KFFIPTQENWLLLTADYSQIELRLMAHFSKDSPLI 460
             FF+PTQENWLLLTADYSQIELRLMAHFS+DS LI
Sbjct: 1893 DFFVPTQENWLLLTADYSQIELRLMAHFSRDSSLI 1927