BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036256
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA94593.2| retrotransposon protein, putative, unclassified [...    46   2e-10
gb|EEE52364.1| hypothetical protein OsJ_34428 [Oryza sativa Japo...    46   2e-10
gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indi...    50   1e-08
gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Ja...    45   3e-08
gb|ABB46931.2| retrotransposon protein, putative, unclassified [...    45   3e-08

>gb|ABA94593.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1469

 Score = 45.8 bits (107), Expect(2) = 2e-10
 Identities = 18/44 (40%), Positives = 25/44 (56%)
 Frame = -2

Query: 141 IWLYTFVYGHPDHSYRSELWNSFTDLAANHSSPWLIVGDLNETL 10
           +W  TFVYG P    R  +W+    L  + + PWL++GD NE L
Sbjct: 526 LWHATFVYGEPRVENRHNMWSMLRSLRNSSNLPWLVIGDFNEAL 569



 Score = 43.9 bits (102), Expect(2) = 2e-10
 Identities = 22/48 (45%), Positives = 31/48 (64%)
 Frame = -1

Query: 292 LGFQHSANFPSNGRSGGLWLCWNDNFDLEILHCCERYIAALVKNNPLG 149
           LG +  A   S+G SGGL L W+++ ++EI   CERYI A V+ +P G
Sbjct: 477 LGLRGFAGVDSDGMSGGLALYWHESVNVEIKALCERYIDAYVRLSPDG 524


>gb|EEE52364.1| hypothetical protein OsJ_34428 [Oryza sativa Japonica Group]
          Length = 1102

 Score = 45.8 bits (107), Expect(2) = 2e-10
 Identities = 18/44 (40%), Positives = 25/44 (56%)
 Frame = -2

Query: 141 IWLYTFVYGHPDHSYRSELWNSFTDLAANHSSPWLIVGDLNETL 10
           +W  TFVYG P    R  +W+    L  + + PWL++GD NE L
Sbjct: 533 LWHATFVYGEPRVENRHNMWSMLRSLRNSSNLPWLVIGDFNEAL 576



 Score = 43.9 bits (102), Expect(2) = 2e-10
 Identities = 22/48 (45%), Positives = 31/48 (64%)
 Frame = -1

Query: 292 LGFQHSANFPSNGRSGGLWLCWNDNFDLEILHCCERYIAALVKNNPLG 149
           LG +  A   S+G SGGL L W+++ ++EI   CERYI A V+ +P G
Sbjct: 484 LGLRGFAGVDSDGMSGGLALYWHESVNVEIKALCERYIDAYVRLSPDG 531


>gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indica Group]
          Length = 1784

 Score = 49.7 bits (117), Expect(2) = 1e-08
 Identities = 19/44 (43%), Positives = 27/44 (61%)
 Frame = -2

Query: 141 IWLYTFVYGHPDHSYRSELWNSFTDLAANHSSPWLIVGDLNETL 10
           IW  TFVYG P   +R  +W+    +  + + PWL++GD NETL
Sbjct: 100 IWHVTFVYGEPRVEHRHRMWSMLNSIKQSSNLPWLVLGDFNETL 143



 Score = 34.3 bits (77), Expect(2) = 1e-08
 Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
 Frame = -1

Query: 298 SSLGFQHSANFPSNGRSGGLWLCWNDNFDLEILHCCERYIAALVK---NNPL 152
           S LG +       NG SGGL L W+++  +EI    ERYI A V+   N+P+
Sbjct: 49  SRLGLRGFVGENCNGMSGGLALFWDESVFVEIKGINERYIDAYVRLSVNDPI 100


>gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1888

 Score = 45.1 bits (105), Expect(2) = 3e-08
 Identities = 19/44 (43%), Positives = 23/44 (52%)
 Frame = -2

Query: 141 IWLYTFVYGHPDHSYRSELWNSFTDLAANHSSPWLIVGDLNETL 10
           +W  TFVYG P    R  +W     +      PWL+VGD NETL
Sbjct: 755 VWHATFVYGEPRVENRHRMWALLNSIKQVSDLPWLVVGDFNETL 798



 Score = 37.7 bits (86), Expect(2) = 3e-08
 Identities = 19/43 (44%), Positives = 27/43 (62%)
 Frame = -1

Query: 292 LGFQHSANFPSNGRSGGLWLCWNDNFDLEILHCCERYIAALVK 164
           LG +  A   S+G SGGL L W+++  +EI+   ERYI A V+
Sbjct: 706 LGLRGFAGVNSDGMSGGLALFWHESIHVEIISMNERYIDAYVR 748


>gb|ABB46931.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1853

 Score = 45.1 bits (105), Expect(2) = 3e-08
 Identities = 19/44 (43%), Positives = 23/44 (52%)
 Frame = -2

Query: 141 IWLYTFVYGHPDHSYRSELWNSFTDLAANHSSPWLIVGDLNETL 10
           +W  TFVYG P    R  +W     +      PWL+VGD NETL
Sbjct: 755 VWHATFVYGEPRVENRHRMWALLNSIKQVSDLPWLVVGDFNETL 798



 Score = 37.7 bits (86), Expect(2) = 3e-08
 Identities = 19/43 (44%), Positives = 27/43 (62%)
 Frame = -1

Query: 292 LGFQHSANFPSNGRSGGLWLCWNDNFDLEILHCCERYIAALVK 164
           LG +  A   S+G SGGL L W+++  +EI+   ERYI A V+
Sbjct: 706 LGLRGFAGVNSDGMSGGLALFWHESIHVEIISMNERYIDAYVR 748