BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036242
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15366.3| unnamed protein product [Vitis vinifera]              122   4e-26
ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containi...   122   4e-26
ref|XP_002322051.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containi...   112   3e-23
ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containi...   112   3e-23

>emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  122 bits (305), Expect = 4e-26
 Identities = 58/101 (57%), Positives = 73/101 (72%)
 Frame = -2

Query: 304 SPLDSRLVFDGLNRKNLYQWNALISGYTRNELWGEAVLVFCELITVTDFRPDNYTMPCVV 125
           SP DSR+VFD L RKNL+QWNA++S YTRNEL+ +A+ +F ELI+VT+ +PDN+T+PCV+
Sbjct: 156 SPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVI 215

Query: 124 KACGGLLSXXXXXXXXXXXXXXXLDSDAYVCNALIAMYGKC 2
           KAC GLL                L SD +V NALIAMYGKC
Sbjct: 216 KACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKC 256


>ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  122 bits (305), Expect = 4e-26
 Identities = 58/101 (57%), Positives = 73/101 (72%)
 Frame = -2

Query: 304 SPLDSRLVFDGLNRKNLYQWNALISGYTRNELWGEAVLVFCELITVTDFRPDNYTMPCVV 125
           SP DSR+VFD L RKNL+QWNA++S YTRNEL+ +A+ +F ELI+VT+ +PDN+T+PCV+
Sbjct: 49  SPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVI 108

Query: 124 KACGGLLSXXXXXXXXXXXXXXXLDSDAYVCNALIAMYGKC 2
           KAC GLL                L SD +V NALIAMYGKC
Sbjct: 109 KACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKC 149


>ref|XP_002322051.1| predicted protein [Populus trichocarpa] gi|222869047|gb|EEF06178.1|
           predicted protein [Populus trichocarpa]
          Length = 924

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/101 (55%), Positives = 69/101 (68%)
 Frame = -2

Query: 304 SPLDSRLVFDGLNRKNLYQWNALISGYTRNELWGEAVLVFCELITVTDFRPDNYTMPCVV 125
           SPLDSRLVFD +  KNL QWNAL+SGYTRN L+G+ V VF +L++ TDF+PDN+T P V+
Sbjct: 94  SPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVI 153

Query: 124 KACGGLLSXXXXXXXXXXXXXXXLDSDAYVCNALIAMYGKC 2
           KACGG+L                L  D +V NAL+ MYGKC
Sbjct: 154 KACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKC 194


>ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  112 bits (280), Expect = 3e-23
 Identities = 54/100 (54%), Positives = 68/100 (68%)
 Frame = -2

Query: 301 PLDSRLVFDGLNRKNLYQWNALISGYTRNELWGEAVLVFCELITVTDFRPDNYTMPCVVK 122
           PL+SRLVFD L  KNL+QWNAL+SGY RNEL+ EA+  F ELI+VT+F+PDN+T PC++K
Sbjct: 159 PLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIK 218

Query: 121 ACGGLLSXXXXXXXXXXXXXXXLDSDAYVCNALIAMYGKC 2
           AC G                  L  D +V NA+IA+YGKC
Sbjct: 219 ACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKC 258


>ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  112 bits (280), Expect = 3e-23
 Identities = 54/100 (54%), Positives = 68/100 (68%)
 Frame = -2

Query: 301 PLDSRLVFDGLNRKNLYQWNALISGYTRNELWGEAVLVFCELITVTDFRPDNYTMPCVVK 122
           PL+SRLVFD L  KNL+QWNAL+SGY RNEL+ EA+  F ELI+VT+F+PDN+T PC++K
Sbjct: 159 PLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIK 218

Query: 121 ACGGLLSXXXXXXXXXXXXXXXLDSDAYVCNALIAMYGKC 2
           AC G                  L  D +V NA+IA+YGKC
Sbjct: 219 ACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKC 258