BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036228
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal doma...    81   1e-13
ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal doma...    81   1e-13
ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal doma...    81   1e-13
emb|CBI35690.3| unnamed protein product [Vitis vinifera]               81   1e-13
emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera]    81   1e-13

>ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
           [Vitis vinifera]
          Length = 860

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/68 (63%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
 Frame = +3

Query: 42  GCILSREIRITKFSQPSERCTPLAVFHTITGPTSGLCFKMESVAHDS--SPLFVLHSTLL 215
           G  L +EIRI+ +SQPSERC PLAV HTIT  + G+CFKMES    S  +PL++LHST +
Sbjct: 24  GLELMKEIRISHYSQPSERCPPLAVLHTIT--SCGVCFKMESSKAQSQDTPLYLLHSTCI 81

Query: 216 RENKTAVM 239
           RENKTAVM
Sbjct: 82  RENKTAVM 89


>ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Glycine max]
          Length = 960

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/78 (55%), Positives = 52/78 (66%)
 Frame = +3

Query: 6   NNNSNQYHQIISGCILSREIRITKFSQPSERCTPLAVFHTITGPTSGLCFKMESVAHDSS 185
           NNN+  Y++        +EIRI+ FSQPSERC PLAV HT+T  + G+CFKMES      
Sbjct: 25  NNNNKNYNKNFH----VKEIRISHFSQPSERCPPLAVLHTVT--SCGVCFKMESKTQQQD 78

Query: 186 PLFVLHSTLLRENKTAVM 239
            LF LHS  +RENKTAVM
Sbjct: 79  GLFQLHSLCIRENKTAVM 96


>ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Glycine max]
          Length = 954

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/79 (54%), Positives = 51/79 (64%)
 Frame = +3

Query: 3   KNNNSNQYHQIISGCILSREIRITKFSQPSERCTPLAVFHTITGPTSGLCFKMESVAHDS 182
           +NNN   +H         +EIRI+ FSQPSERC PLAV HT+T  + G+CFKMES     
Sbjct: 22  ENNNYKNFHV--------KEIRISHFSQPSERCPPLAVLHTVT--SCGVCFKMESKTQQQ 71

Query: 183 SPLFVLHSTLLRENKTAVM 239
             LF LHS  +RENKTAVM
Sbjct: 72  DGLFQLHSLCIRENKTAVM 90


>emb|CBI35690.3| unnamed protein product [Vitis vinifera]
          Length = 788

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/68 (63%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
 Frame = +3

Query: 42  GCILSREIRITKFSQPSERCTPLAVFHTITGPTSGLCFKMESVAHDS--SPLFVLHSTLL 215
           G  L +EIRI+ +SQPSERC PLAV HTIT  + G+CFKMES    S  +PL++LHST +
Sbjct: 24  GLELMKEIRISHYSQPSERCPPLAVLHTIT--SCGVCFKMESSKAQSQDTPLYLLHSTCI 81

Query: 216 RENKTAVM 239
           RENKTAVM
Sbjct: 82  RENKTAVM 89


>emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera]
          Length = 894

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/68 (63%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
 Frame = +3

Query: 42  GCILSREIRITKFSQPSERCTPLAVFHTITGPTSGLCFKMESVAHDS--SPLFVLHSTLL 215
           G  L +EIRI+ +SQPSERC PLAV HTIT  + G+CFKMES    S  +PL++LHST +
Sbjct: 24  GLELMKEIRISHYSQPSERCPPLAVLHTIT--SCGVCFKMESSKAQSQDTPLYLLHSTCI 81

Query: 216 RENKTAVM 239
           RENKTAVM
Sbjct: 82  RENKTAVM 89