BLASTX nr result

ID: Coptis23_contig00036225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036225
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271655.2| PREDICTED: uncharacterized protein LOC100258...    67   2e-09
emb|CBI23051.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|XP_002321979.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_003602296.1| Neuroblastoma-amplified sequence [Medicago t...    63   2e-08
ref|XP_002317800.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08

>ref|XP_002271655.2| PREDICTED: uncharacterized protein LOC100258836 [Vitis vinifera]
          Length = 2390

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/64 (53%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
 Frame = -2

Query: 186  MICLPYGALPMQWLEAVEAKLKQG--NPDVSEDHELFTLCLSSGAMSTIATDSAYETTFS 13
            ++ LPY A+ +Q   +VE KLKQG  +  +  DHEL  L LSSG +S I T S+Y TTFS
Sbjct: 2198 VLLLPYEAMQLQCANSVEEKLKQGGISDTIGRDHELLLLILSSGIISNIITQSSYGTTFS 2257

Query: 12   YLCY 1
            YLCY
Sbjct: 2258 YLCY 2261


>emb|CBI23051.3| unnamed protein product [Vitis vinifera]
          Length = 2325

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/64 (53%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
 Frame = -2

Query: 186  MICLPYGALPMQWLEAVEAKLKQG--NPDVSEDHELFTLCLSSGAMSTIATDSAYETTFS 13
            ++ LPY A+ +Q   +VE KLKQG  +  +  DHEL  L LSSG +S I T S+Y TTFS
Sbjct: 2216 VLLLPYEAMQLQCANSVEEKLKQGGISDTIGRDHELLLLILSSGIISNIITQSSYGTTFS 2275

Query: 12   YLCY 1
            YLCY
Sbjct: 2276 YLCY 2279


>ref|XP_002321979.1| predicted protein [Populus trichocarpa] gi|222868975|gb|EEF06106.1|
            predicted protein [Populus trichocarpa]
          Length = 2421

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/64 (51%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
 Frame = -2

Query: 186  MICLPYGALPMQWLEAVEAKLKQGNPD--VSEDHELFTLCLSSGAMSTIATDSAYETTFS 13
            ++ LPY A+ +Q L+ VE KLKQG        DHE   L LSSG +STI    +Y TTFS
Sbjct: 2223 VLLLPYEAIQLQCLDVVEDKLKQGGISDLAGRDHEFLMLVLSSGVISTIIAKPSYSTTFS 2282

Query: 12   YLCY 1
            YLCY
Sbjct: 2283 YLCY 2286


>ref|XP_003602296.1| Neuroblastoma-amplified sequence [Medicago truncatula]
            gi|355491344|gb|AES72547.1| Neuroblastoma-amplified
            sequence [Medicago truncatula]
          Length = 2401

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/62 (54%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
 Frame = -2

Query: 183  ICLPYGALPMQWLEAVEAKLKQGNPDV-SEDHELFTLCLSSGAMSTIATDSAYETTFSYL 7
            + LPY  L +Q L AVE  ++QG P   S+D EL  L LSSG +++IAT S Y TTFSYL
Sbjct: 2201 LMLPYKTLQLQCLGAVEDSVRQGIPQTRSKDCELLILILSSGILTSIATGSTYGTTFSYL 2260

Query: 6    CY 1
            CY
Sbjct: 2261 CY 2262


>ref|XP_002317800.1| predicted protein [Populus trichocarpa] gi|222858473|gb|EEE96020.1|
            predicted protein [Populus trichocarpa]
          Length = 2414

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/63 (52%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
 Frame = -2

Query: 183  ICLPYGALPMQWLEAVEAKLKQGNPD--VSEDHELFTLCLSSGAMSTIATDSAYETTFSY 10
            + LPY A+ +Q L  VE KLKQG     +  DHE+  L LSSG +S I T  +Y TTFSY
Sbjct: 2216 LLLPYEAIQLQCLNVVEDKLKQGGISGVLGRDHEVLMLVLSSGVISNIITKPSYGTTFSY 2275

Query: 9    LCY 1
            LCY
Sbjct: 2276 LCY 2278


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