BLASTX nr result

ID: Coptis23_contig00036220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036220
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168694.1| PREDICTED: uncharacterized RNA methyltransfe...   149   2e-34
ref|XP_004145672.1| PREDICTED: uncharacterized RNA methyltransfe...   149   2e-34
ref|XP_003548525.1| PREDICTED: uncharacterized RNA methyltransfe...   149   3e-34
ref|XP_002509532.1| conserved hypothetical protein [Ricinus comm...   149   3e-34
ref|XP_002456847.1| hypothetical protein SORBIDRAFT_03g044000 [S...   138   5e-31

>ref|XP_004168694.1| PREDICTED: uncharacterized RNA methyltransferase pc1998-like,
           partial [Cucumis sativus]
          Length = 414

 Score =  149 bits (376), Expect = 2e-34
 Identities = 68/86 (79%), Positives = 81/86 (94%)
 Frame = +2

Query: 2   CRAKLAVRGSSVNPWIGLYREGSHNVVDIPFCRAHHPNINAAMELLKQGIVECGVEPYDE 181
           CRAKLAVRGSS++P IGLY+EG+HNVVDIP C+AHHPNINAA+ELLK+GI E  +EPYDE
Sbjct: 3   CRAKLAVRGSSISPMIGLYQEGTHNVVDIPDCKAHHPNINAAVELLKRGITEFDIEPYDE 62

Query: 182 DEGTGELRYVQMAVTTYSTSLPAAER 259
           D+GTG+LRYVQ+AVTTYSTSLP++ER
Sbjct: 63  DQGTGDLRYVQLAVTTYSTSLPSSER 88


>ref|XP_004145672.1| PREDICTED: uncharacterized RNA methyltransferase pc1998-like
           [Cucumis sativus]
          Length = 519

 Score =  149 bits (376), Expect = 2e-34
 Identities = 68/86 (79%), Positives = 81/86 (94%)
 Frame = +2

Query: 2   CRAKLAVRGSSVNPWIGLYREGSHNVVDIPFCRAHHPNINAAMELLKQGIVECGVEPYDE 181
           CRAKLAVRGSS++P IGLY+EG+HNVVDIP C+AHHPNINAA+ELLK+GI E  +EPYDE
Sbjct: 108 CRAKLAVRGSSISPMIGLYQEGTHNVVDIPDCKAHHPNINAAVELLKRGITEFDIEPYDE 167

Query: 182 DEGTGELRYVQMAVTTYSTSLPAAER 259
           D+GTG+LRYVQ+AVTTYSTSLP++ER
Sbjct: 168 DQGTGDLRYVQLAVTTYSTSLPSSER 193


>ref|XP_003548525.1| PREDICTED: uncharacterized RNA methyltransferase pc1998-like
           [Glycine max]
          Length = 515

 Score =  149 bits (375), Expect = 3e-34
 Identities = 70/86 (81%), Positives = 79/86 (91%)
 Frame = +2

Query: 2   CRAKLAVRGSSVNPWIGLYREGSHNVVDIPFCRAHHPNINAAMELLKQGIVECGVEPYDE 181
           CRAKLAVRGSS  P IGLY EG+HNVVDIP C+AHHPNINAA+ELL++GI+E GVEPY E
Sbjct: 102 CRAKLAVRGSSTEPLIGLYEEGTHNVVDIPQCQAHHPNINAAVELLRRGIIEIGVEPYIE 161

Query: 182 DEGTGELRYVQMAVTTYSTSLPAAER 259
           DEGTG+LRYVQMAVTTY+TSLPAA+R
Sbjct: 162 DEGTGDLRYVQMAVTTYNTSLPAAQR 187


>ref|XP_002509532.1| conserved hypothetical protein [Ricinus communis]
           gi|223549431|gb|EEF50919.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 518

 Score =  149 bits (375), Expect = 3e-34
 Identities = 68/86 (79%), Positives = 80/86 (93%)
 Frame = +2

Query: 2   CRAKLAVRGSSVNPWIGLYREGSHNVVDIPFCRAHHPNINAAMELLKQGIVECGVEPYDE 181
           CRAKLAVRGSS+ P IGLY+EG+HNVVDIP C+AHHP+INAA+ELL+QGI E  +EPYDE
Sbjct: 104 CRAKLAVRGSSMQPLIGLYQEGTHNVVDIPHCKAHHPSINAAVELLRQGITELNIEPYDE 163

Query: 182 DEGTGELRYVQMAVTTYSTSLPAAER 259
           D+GTG+LRYVQMAVTTY+TSLPA+ER
Sbjct: 164 DQGTGDLRYVQMAVTTYNTSLPASER 189


>ref|XP_002456847.1| hypothetical protein SORBIDRAFT_03g044000 [Sorghum bicolor]
           gi|241928822|gb|EES01967.1| hypothetical protein
           SORBIDRAFT_03g044000 [Sorghum bicolor]
          Length = 520

 Score =  138 bits (347), Expect = 5e-31
 Identities = 62/86 (72%), Positives = 77/86 (89%)
 Frame = +2

Query: 2   CRAKLAVRGSSVNPWIGLYREGSHNVVDIPFCRAHHPNINAAMELLKQGIVECGVEPYDE 181
           CRAKLAVRG+  NP IGLY+EG+H+V+DIP CRAHHP+INAA++LL+QGI E G++P+DE
Sbjct: 139 CRAKLAVRGTPENPLIGLYQEGTHDVIDIPECRAHHPSINAAVKLLRQGITELGIQPFDE 198

Query: 182 DEGTGELRYVQMAVTTYSTSLPAAER 259
           D GTGELRYVQMAVTTY+TS+P  +R
Sbjct: 199 DAGTGELRYVQMAVTTYNTSIPVDKR 224


Top