BLASTX nr result

ID: Coptis23_contig00036218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036218
         (688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274192.2| PREDICTED: protein SPA1-RELATED 3 [Vitis vin...   228   7e-58
emb|CAN64346.1| hypothetical protein VITISV_017786 [Vitis vinifera]   228   7e-58
ref|XP_002533551.1| ubiquitin ligase protein cop1, putative [Ric...   222   6e-56
ref|XP_003541845.1| PREDICTED: protein SPA1-RELATED 3-like [Glyc...   212   6e-53
ref|XP_003539598.1| PREDICTED: protein SPA1-RELATED 3-like [Glyc...   208   7e-52

>ref|XP_002274192.2| PREDICTED: protein SPA1-RELATED 3 [Vitis vinifera]
          Length = 906

 Score =  228 bits (582), Expect = 7e-58
 Identities = 129/230 (56%), Positives = 159/230 (69%), Gaps = 3/230 (1%)
 Frame = -2

Query: 681  IVKKQEGSLSELDGNNHSAMVKGEHLSM---DQVRNVLGPRKRGRAGVHFSGTEEYSEHQ 511
            I+ K+ GS  +L  +  S   K ++ S     +    LG RKR R G      E++SEH 
Sbjct: 418  ILNKKGGSFLKLKRDELSVFDKVDYPSQCLAGKGSASLGLRKRIRQGHDPHCVEDWSEHL 477

Query: 510  AEVEKEDSCADSQGSVLSKSSRLMKNFKKLESAYFSTRCRLVEPTAKMLSRCSQRSNNNR 331
             EV+K ++ + +Q ++LSK SRLMKNFKKLESAYFSTRC+  +PT KML+  S  S+   
Sbjct: 478  DEVQKSETQSGNQEAILSKGSRLMKNFKKLESAYFSTRCKPSKPTEKMLTS-SPISSTGW 536

Query: 330  GSVVMTEGSRVDDLALKQGNARSRKSEWINPFLEGLCKYLSFSKLEVKADLKQGDXXXXX 151
            GS+V+TEGS VD+L  K G    + S WINPFLEGLCKYLSFS L+V+ADLKQGD     
Sbjct: 537  GSLVITEGSSVDNLVSKAGYNEGKGSRWINPFLEGLCKYLSFSNLKVRADLKQGDLLNSP 596

Query: 150  XXXXXXSFDRDKEFFATAGVNKKIKVFECDMILSENRDIHYPVVEMASRS 1
                  SFDRD+EFFATAGVNKKIK+FECDMIL+ENRDIHYPV EMAS+S
Sbjct: 597  NLVCSLSFDRDREFFATAGVNKKIKIFECDMILNENRDIHYPVTEMASQS 646


>emb|CAN64346.1| hypothetical protein VITISV_017786 [Vitis vinifera]
          Length = 1795

 Score =  228 bits (582), Expect = 7e-58
 Identities = 129/230 (56%), Positives = 159/230 (69%), Gaps = 3/230 (1%)
 Frame = -2

Query: 681 IVKKQEGSLSELDGNNHSAMVKGEHLSM---DQVRNVLGPRKRGRAGVHFSGTEEYSEHQ 511
           I+ K+ GS  +L  +  S   K ++ S     +    LG RKR R G      E++SEH 
Sbjct: 79  ILNKKGGSFLKLKRDELSVFDKVDYPSQCLAGKGSASLGLRKRIRQGHDPHCVEDWSEHL 138

Query: 510 AEVEKEDSCADSQGSVLSKSSRLMKNFKKLESAYFSTRCRLVEPTAKMLSRCSQRSNNNR 331
            EV+K ++ + +Q ++LSK SRLMKNFKKLESAYFSTRC+  +PT KML+  S  S+   
Sbjct: 139 DEVQKSETQSGNQEAILSKGSRLMKNFKKLESAYFSTRCKPSKPTEKMLTS-SPISSTGW 197

Query: 330 GSVVMTEGSRVDDLALKQGNARSRKSEWINPFLEGLCKYLSFSKLEVKADLKQGDXXXXX 151
           GS+V+TEGS VD+L  K G    + S WINPFLEGLCKYLSFS L+V+ADLKQGD     
Sbjct: 198 GSLVITEGSSVDNLVSKAGYNEGKGSRWINPFLEGLCKYLSFSNLKVRADLKQGDLLNSP 257

Query: 150 XXXXXXSFDRDKEFFATAGVNKKIKVFECDMILSENRDIHYPVVEMASRS 1
                 SFDRD+EFFATAGVNKKIK+FECDMIL+ENRDIHYPV EMAS+S
Sbjct: 258 NLVCSLSFDRDREFFATAGVNKKIKIFECDMILNENRDIHYPVTEMASQS 307


>ref|XP_002533551.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
            gi|223526576|gb|EEF28831.1| ubiquitin ligase protein
            cop1, putative [Ricinus communis]
          Length = 889

 Score =  222 bits (565), Expect = 6e-56
 Identities = 118/229 (51%), Positives = 158/229 (68%), Gaps = 1/229 (0%)
 Frame = -2

Query: 684  SIVKKQEGS-LSELDGNNHSAMVKGEHLSMDQVRNVLGPRKRGRAGVHFSGTEEYSEHQA 508
            + +KK+ GS L  +  +N  + +    +  +   + LG RKR R G+     EE+ +++ 
Sbjct: 401  TFLKKKGGSCLERMKDDNLVSNLPPFSIVDNDDSSSLGSRKRFRPGIQIFNMEEFDDNRD 460

Query: 507  EVEKEDSCADSQGSVLSKSSRLMKNFKKLESAYFSTRCRLVEPTAKMLSRCSQRSNNNRG 328
            + +  D   +SQ S+L KSSRLMKNFKKLESAYF TRCR +  + K   R S  S++ RG
Sbjct: 461  DAQHSDMVTESQDSLLLKSSRLMKNFKKLESAYFLTRCRPIRSSGKPFIRYSPISSDGRG 520

Query: 327  SVVMTEGSRVDDLALKQGNARSRKSEWINPFLEGLCKYLSFSKLEVKADLKQGDXXXXXX 148
            S V++E S +++LA K+ +  SR+S WI+PFLEGLCKYLSF+KL++KADLKQGD      
Sbjct: 521  STVVSERSSINNLAPKEQHVESRQSGWISPFLEGLCKYLSFNKLKIKADLKQGDLLNSSN 580

Query: 147  XXXXXSFDRDKEFFATAGVNKKIKVFECDMILSENRDIHYPVVEMASRS 1
                 SFDRD EFFATAGVNKKIK+FECD I++ENRDIHYPVVE+A+RS
Sbjct: 581  LVCSLSFDRDGEFFATAGVNKKIKIFECDAIINENRDIHYPVVEIATRS 629


>ref|XP_003541845.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max]
          Length = 892

 Score =  212 bits (539), Expect = 6e-53
 Identities = 126/227 (55%), Positives = 149/227 (65%), Gaps = 1/227 (0%)
 Frame = -2

Query: 678  VKKQEGSLSELDGNNHSAMVKGEHLSMDQVRNV-LGPRKRGRAGVHFSGTEEYSEHQAEV 502
            V+ +E + +EL  + HSA        +D   +  LG RKR R G+     EE  +   + 
Sbjct: 413  VRFKEITGAELGSDEHSASSFPSMTVVDSEGSAFLGTRKRVRLGMDVKNIEECVDDVGDD 472

Query: 501  EKEDSCADSQGSVLSKSSRLMKNFKKLESAYFSTRCRLVEPTAKMLSRCSQRSNNNRGSV 322
            +K      S GS LSKSSRLMKNFKKLESAYF TRCR    + K+  R    +++ RGSV
Sbjct: 473  QK------SNGSFLSKSSRLMKNFKKLESAYFLTRCRPAYSSGKLAVRHPPVTSDGRGSV 526

Query: 321  VMTEGSRVDDLALKQGNARSRKSEWINPFLEGLCKYLSFSKLEVKADLKQGDXXXXXXXX 142
            VMTE S ++DL  K+   R   S WINPFLEGLCKYLSFSKL+VKADLKQGD        
Sbjct: 527  VMTERSCINDLKSKE-QCREGASAWINPFLEGLCKYLSFSKLKVKADLKQGDLLHSSNLV 585

Query: 141  XXXSFDRDKEFFATAGVNKKIKVFECDMILSENRDIHYPVVEMASRS 1
               SFDRD EFFATAGVNKKIKVFECD I++E+RDIHYPVVEMASRS
Sbjct: 586  CSLSFDRDGEFFATAGVNKKIKVFECDSIINEDRDIHYPVVEMASRS 632


>ref|XP_003539598.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max]
          Length = 892

 Score =  208 bits (530), Expect = 7e-52
 Identities = 117/193 (60%), Positives = 134/193 (69%)
 Frame = -2

Query: 579  LGPRKRGRAGVHFSGTEEYSEHQAEVEKEDSCADSQGSVLSKSSRLMKNFKKLESAYFST 400
            LG RKR R G+     EE  +   + +K      S GS LSKSSRLMKNFKKLESAYF T
Sbjct: 446  LGTRKRVRLGMDVKNIEECDDDVGDDQK------SNGSFLSKSSRLMKNFKKLESAYFLT 499

Query: 399  RCRLVEPTAKMLSRCSQRSNNNRGSVVMTEGSRVDDLALKQGNARSRKSEWINPFLEGLC 220
            RCR    + K+  R    +++ RGSVV+TE S ++DL  K+   R   S WINPFLEGLC
Sbjct: 500  RCRPAYSSGKLAVRHPPVTSDGRGSVVVTERSCINDLKSKE-QCREGASAWINPFLEGLC 558

Query: 219  KYLSFSKLEVKADLKQGDXXXXXXXXXXXSFDRDKEFFATAGVNKKIKVFECDMILSENR 40
            KYLSFSKL+VKADLKQGD           SFDRD EFFATAGVNKKIKVFECD I++E+R
Sbjct: 559  KYLSFSKLKVKADLKQGDLLHSSNLVCSLSFDRDGEFFATAGVNKKIKVFECDSIINEDR 618

Query: 39   DIHYPVVEMASRS 1
            DIHYPVVEMASRS
Sbjct: 619  DIHYPVVEMASRS 631


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