BLASTX nr result

ID: Coptis23_contig00036209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036209
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139946.1| PREDICTED: mannan endo-1,4-beta-mannosidase ...   139   2e-31
ref|XP_002273772.1| PREDICTED: mannan endo-1,4-beta-mannosidase ...   138   4e-31
emb|CBI21857.3| unnamed protein product [Vitis vinifera]              138   4e-31
ref|NP_179660.2| mannan endo-1,4-beta-mannosidase 2 [Arabidopsis...   137   1e-30
gb|AAD20927.1| (1-4)-beta-mannan endohydrolase [Arabidopsis thal...   137   1e-30

>ref|XP_004139946.1| PREDICTED: mannan endo-1,4-beta-mannosidase 2-like [Cucumis
           sativus] gi|449475777|ref|XP_004154548.1| PREDICTED:
           mannan endo-1,4-beta-mannosidase 2-like [Cucumis
           sativus]
          Length = 431

 Score =  139 bits (350), Expect = 2e-31
 Identities = 67/112 (59%), Positives = 81/112 (72%)
 Frame = +3

Query: 3   EIEDKLKFVKEWMLSHIDDGDHILKKPVLFTEFGLSKNKKNFERSNRDRFYKTIFDTIYE 182
           + ED+LKFV +WMLSHI+DGD  LKKPV+FTEFGLS   K F  + RD FYKT++D IY+
Sbjct: 302 DFEDELKFVSKWMLSHIEDGDKELKKPVMFTEFGLSDLNKGFTPAQRDSFYKTVYDVIYK 361

Query: 183 SXXXXXXXXXXXXWQFMVEGMEEYSDDYGIVPWEIPSIYKLIKEQSRKLAEI 338
           S            WQF+VEGMEE +DD+GIVPWE  SIY+LI EQS +LA I
Sbjct: 362 SAKRNRSGAGSLAWQFLVEGMEESNDDFGIVPWERSSIYQLIIEQSCRLARI 413


>ref|XP_002273772.1| PREDICTED: mannan endo-1,4-beta-mannosidase 2-like [Vitis vinifera]
          Length = 437

 Score =  138 bits (348), Expect = 4e-31
 Identities = 63/112 (56%), Positives = 81/112 (72%)
 Frame = +3

Query: 3   EIEDKLKFVKEWMLSHIDDGDHILKKPVLFTEFGLSKNKKNFERSNRDRFYKTIFDTIYE 182
           E E +LK+V +WMLSHI+DG+  LKKPV+FTEFG S + KNF  S RDRF+KT+FD +Y+
Sbjct: 307 EFEAELKYVSKWMLSHIEDGEKELKKPVMFTEFGFSTDNKNFHPSKRDRFFKTVFDVMYQ 366

Query: 183 SXXXXXXXXXXXXWQFMVEGMEEYSDDYGIVPWEIPSIYKLIKEQSRKLAEI 338
           S            WQF+V GMEEY+DD+GIVPWE P+ Y+LI E + +LA I
Sbjct: 367 SARKNGAGAGSFVWQFLVGGMEEYNDDFGIVPWERPATYRLITEHTCRLARI 418


>emb|CBI21857.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score =  138 bits (348), Expect = 4e-31
 Identities = 63/112 (56%), Positives = 81/112 (72%)
 Frame = +3

Query: 3   EIEDKLKFVKEWMLSHIDDGDHILKKPVLFTEFGLSKNKKNFERSNRDRFYKTIFDTIYE 182
           E E +LK+V +WMLSHI+DG+  LKKPV+FTEFG S + KNF  S RDRF+KT+FD +Y+
Sbjct: 302 EFEAELKYVSKWMLSHIEDGEKELKKPVMFTEFGFSTDNKNFHPSKRDRFFKTVFDVMYQ 361

Query: 183 SXXXXXXXXXXXXWQFMVEGMEEYSDDYGIVPWEIPSIYKLIKEQSRKLAEI 338
           S            WQF+V GMEEY+DD+GIVPWE P+ Y+LI E + +LA I
Sbjct: 362 SARKNGAGAGSFVWQFLVGGMEEYNDDFGIVPWERPATYRLITEHTCRLARI 413


>ref|NP_179660.2| mannan endo-1,4-beta-mannosidase 2 [Arabidopsis thaliana]
           gi|75233455|sp|Q7Y223.1|MAN2_ARATH RecName: Full=Mannan
           endo-1,4-beta-mannosidase 2; AltName:
           Full=Beta-mannanase 2; AltName:
           Full=Endo-beta-1,4-mannanase 2; Short=AtMAN2; Flags:
           Precursor gi|30793940|gb|AAP40422.1| putative glycosyl
           hydrolase family 5 protein/cellulase ((1-4)-beta-mannan
           endohydrolase) [Arabidopsis thaliana]
           gi|109134159|gb|ABG25077.1| At2g20680 [Arabidopsis
           thaliana] gi|110737068|dbj|BAF00487.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|330251962|gb|AEC07056.1| mannan
           endo-1,4-beta-mannosidase 2 [Arabidopsis thaliana]
          Length = 433

 Score =  137 bits (344), Expect = 1e-30
 Identities = 65/110 (59%), Positives = 82/110 (74%)
 Frame = +3

Query: 9   EDKLKFVKEWMLSHIDDGDHILKKPVLFTEFGLSKNKKNFERSNRDRFYKTIFDTIYESX 188
           E+KLKFV +WMLSHI+DGD  LKKPVLFTEFGLS   K+++ S RDRFY+TIFD IY+S 
Sbjct: 306 EEKLKFVVKWMLSHIEDGDKELKKPVLFTEFGLSNLNKDYDPSQRDRFYRTIFDVIYKSA 365

Query: 189 XXXXXXXXXXXWQFMVEGMEEYSDDYGIVPWEIPSIYKLIKEQSRKLAEI 338
                      WQF++EGME ++DD+GIVPWE  SI +L+ EQS +L+ I
Sbjct: 366 KRKRSGAGTLVWQFLIEGMEGFNDDFGIVPWEQDSIQRLMIEQSCRLSRI 415


>gb|AAD20927.1| (1-4)-beta-mannan endohydrolase [Arabidopsis thaliana]
          Length = 403

 Score =  137 bits (344), Expect = 1e-30
 Identities = 65/110 (59%), Positives = 82/110 (74%)
 Frame = +3

Query: 9   EDKLKFVKEWMLSHIDDGDHILKKPVLFTEFGLSKNKKNFERSNRDRFYKTIFDTIYESX 188
           E+KLKFV +WMLSHI+DGD  LKKPVLFTEFGLS   K+++ S RDRFY+TIFD IY+S 
Sbjct: 276 EEKLKFVVKWMLSHIEDGDKELKKPVLFTEFGLSNLNKDYDPSQRDRFYRTIFDVIYKSA 335

Query: 189 XXXXXXXXXXXWQFMVEGMEEYSDDYGIVPWEIPSIYKLIKEQSRKLAEI 338
                      WQF++EGME ++DD+GIVPWE  SI +L+ EQS +L+ I
Sbjct: 336 KRKRSGAGTLVWQFLIEGMEGFNDDFGIVPWEQDSIQRLMIEQSCRLSRI 385


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