BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036204
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containi...   100   1e-19
ref|XP_002326162.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_003625566.1| Pentatricopeptide repeat-containing protein ...    94   1e-17
ref|XP_002525196.1| pentatricopeptide repeat-containing protein,...    93   2e-17
dbj|BAC42187.2| unknown protein [Arabidopsis thaliana]                 91   1e-16

>ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
           chloroplastic [Vitis vinifera]
           gi|297741486|emb|CBI32618.3| unnamed protein product
           [Vitis vinifera]
          Length = 842

 Score =  100 bits (249), Expect = 1e-19
 Identities = 53/100 (53%), Positives = 68/100 (68%), Gaps = 1/100 (1%)
 Frame = +1

Query: 1   ANAGLVEQAIQVLEEMLLAGCEPNSQCCNNLLYACVEACQYDRAFRIFESWRESGFLITS 180
           ANAG+ EQAIQ+ +EMLLAGCEPNSQC N LL+ACVEACQYDRAFR+F+SW++S F   S
Sbjct: 398 ANAGITEQAIQLFKEMLLAGCEPNSQCYNILLHACVEACQYDRAFRLFQSWKDSRFQEIS 457

Query: 181 HXXXXXXXXXXXXCIGAADSSENGITNLRSCYS-SPYMSF 297
                         +G     +N IT++ +C S S ++SF
Sbjct: 458 ------GGTGNGNTVGVELKHQNCITSMPNCLSNSHHLSF 491


>ref|XP_002326162.1| predicted protein [Populus trichocarpa] gi|222833355|gb|EEE71832.1|
           predicted protein [Populus trichocarpa]
          Length = 828

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 42/54 (77%), Positives = 50/54 (92%)
 Frame = +1

Query: 1   ANAGLVEQAIQVLEEMLLAGCEPNSQCCNNLLYACVEACQYDRAFRIFESWRES 162
           ANAGLVEQAIQ+ EEMLL+GC+PNSQCCN LL+ACV+ACQYDRAFR+F+ W+ S
Sbjct: 410 ANAGLVEQAIQLFEEMLLSGCKPNSQCCNILLHACVQACQYDRAFRLFQCWKGS 463


>ref|XP_003625566.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355500581|gb|AES81784.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 829

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 42/58 (72%), Positives = 50/58 (86%)
 Frame = +1

Query: 1   ANAGLVEQAIQVLEEMLLAGCEPNSQCCNNLLYACVEACQYDRAFRIFESWRESGFLI 174
           A+AGLVEQAIQ+ EEMLLAGCEPN+QC N +L+ACVE CQYDRAFR+F SW+ S  L+
Sbjct: 368 AHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILHACVEGCQYDRAFRLFHSWKGSKMLV 425


>ref|XP_002525196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535493|gb|EEF37162.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 786

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 41/54 (75%), Positives = 48/54 (88%)
 Frame = +1

Query: 1   ANAGLVEQAIQVLEEMLLAGCEPNSQCCNNLLYACVEACQYDRAFRIFESWRES 162
           ANAGLV+QAI++ EEMLLAGC PNS CCN LL+ACVEACQYDRAFR+F +W+ S
Sbjct: 342 ANAGLVDQAIKLFEEMLLAGCVPNSHCCNILLHACVEACQYDRAFRLFNAWKGS 395


>dbj|BAC42187.2| unknown protein [Arabidopsis thaliana]
          Length = 852

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 41/54 (75%), Positives = 47/54 (87%)
 Frame = +1

Query: 1   ANAGLVEQAIQVLEEMLLAGCEPNSQCCNNLLYACVEACQYDRAFRIFESWRES 162
           ANAGLVEQA  + EEML +GCEPNSQC N LL+ACVEACQYDRAFR+F+SW+ S
Sbjct: 420 ANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGS 473