BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036183
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   137   7e-31
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              137   7e-31
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]   137   7e-31
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   135   4e-30
ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Me...   135   4e-30

>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D
           subunit 1-like [Vitis vinifera]
          Length = 1560

 Score =  137 bits (346), Expect = 7e-31
 Identities = 63/91 (69%), Positives = 75/91 (82%)
 Frame = +1

Query: 1   PMDSVVLLNPICCSPFRGDFDGDCFHGYIPQSIKSRVELQELVCIDRQLVNGQNGRNLIS 180
           P++SVV +NP+CCSPFRGDFDGDC HGYIPQS+ SRVEL ELV ++RQL+N Q+GRNL+S
Sbjct: 464 PLNSVVSINPLCCSPFRGDFDGDCLHGYIPQSVDSRVELSELVALNRQLINRQSGRNLLS 523

Query: 181 LCHDSLSAAHLLREKGEFLNKVEMQQLGMLC 273
           L  DSLSAAHL+ E G  LN  +MQQL M C
Sbjct: 524 LSQDSLSAAHLVMEDGVLLNLFQMQQLEMFC 554


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  137 bits (346), Expect = 7e-31
 Identities = 63/91 (69%), Positives = 75/91 (82%)
 Frame = +1

Query: 1   PMDSVVLLNPICCSPFRGDFDGDCFHGYIPQSIKSRVELQELVCIDRQLVNGQNGRNLIS 180
           P++SVV +NP+CCSPFRGDFDGDC HGYIPQS+ SRVEL ELV ++RQL+N Q+GRNL+S
Sbjct: 407 PLNSVVSINPLCCSPFRGDFDGDCLHGYIPQSVDSRVELSELVALNRQLINRQSGRNLLS 466

Query: 181 LCHDSLSAAHLLREKGEFLNKVEMQQLGMLC 273
           L  DSLSAAHL+ E G  LN  +MQQL M C
Sbjct: 467 LSQDSLSAAHLVMEDGVLLNLFQMQQLEMFC 497


>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score =  137 bits (346), Expect = 7e-31
 Identities = 63/91 (69%), Positives = 75/91 (82%)
 Frame = +1

Query: 1   PMDSVVLLNPICCSPFRGDFDGDCFHGYIPQSIKSRVELQELVCIDRQLVNGQNGRNLIS 180
           P++SVV +NP+CCSPFRGDFDGDC HGYIPQS+ SRVEL ELV ++RQL+N Q+GRNL+S
Sbjct: 434 PLNSVVSINPLCCSPFRGDFDGDCLHGYIPQSVDSRVELSELVALNRQLINRQSGRNLLS 493

Query: 181 LCHDSLSAAHLLREKGEFLNKVEMQQLGMLC 273
           L  DSLSAAHL+ E G  LN  +MQQL M C
Sbjct: 494 LSQDSLSAAHLVMEDGVLLNLFQMQQLEMFC 524


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
           sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
           QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
           1-like [Cucumis sativus]
          Length = 1469

 Score =  135 bits (339), Expect = 4e-30
 Identities = 60/90 (66%), Positives = 77/90 (85%)
 Frame = +1

Query: 1   PMDSVVLLNPICCSPFRGDFDGDCFHGYIPQSIKSRVELQELVCIDRQLVNGQNGRNLIS 180
           P+ +V+ LNP+CCSPFRGDFDGDC HGY+PQS+++RVE++ELV +D+QL NGQ+GRNL+S
Sbjct: 443 PVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVEVRELVSLDKQLTNGQSGRNLLS 502

Query: 181 LCHDSLSAAHLLREKGEFLNKVEMQQLGML 270
           L HDSL+AAHL+ E G  LN  +MQQL ML
Sbjct: 503 LSHDSLTAAHLILEDGVSLNLFQMQQLQML 532


>ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
           gi|355512499|gb|AES94122.1| DNA-directed RNA polymerase
           subunit beta [Medicago truncatula]
          Length = 1687

 Score =  135 bits (339), Expect = 4e-30
 Identities = 63/93 (67%), Positives = 75/93 (80%)
 Frame = +1

Query: 1   PMDSVVLLNPICCSPFRGDFDGDCFHGYIPQSIKSRVELQELVCIDRQLVNGQNGRNLIS 180
           P+ SVV +NPICCSP RGDFDGDC HGYIPQS+ +RVEL ELV +DRQL+NGQ+G NL+S
Sbjct: 595 PISSVVSINPICCSPLRGDFDGDCLHGYIPQSVGARVELNELVALDRQLINGQSGGNLLS 654

Query: 181 LCHDSLSAAHLLREKGEFLNKVEMQQLGMLCSK 279
           L  DSL+AAHLL E G   N  ++QQL MLC+K
Sbjct: 655 LSQDSLTAAHLLLEDGVGFNIYQVQQLEMLCNK 687