BLASTX nr result

ID: Coptis23_contig00036172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00036172
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA91278.1| hypothetical protein LOC_Os11g03360 [Oryza sativa...    64   2e-08
gb|EEE65520.1| hypothetical protein OsJ_20966 [Oryza sativa Japo...    62   9e-08
gb|EEC80394.1| hypothetical protein OsI_22529 [Oryza sativa Indi...    62   9e-08
gb|EEE59920.1| hypothetical protein OsJ_12548 [Oryza sativa Japo...    60   3e-07
gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indi...    60   3e-07

>gb|ABA91278.1| hypothetical protein LOC_Os11g03360 [Oryza sativa Japonica Group]
          Length = 520

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
 Frame = +1

Query: 277 YVSDLIDNITHAWNINLLNEMFTTDVRAEILQTRIFPQDLDQKIIWTLEKNGIFTIKSTY 456
           YV DL+D  + +WN NL+  +   +   E+L+ R+  Q  +    W LEK G+FT+KS Y
Sbjct: 102 YVKDLMDAGSRSWNENLIRNVMHKEDADEVLKIRLSNQQPENFPAWHLEKTGLFTVKSAY 161

Query: 457 --SWFLSQSKV-GRPLRSLSIAKTTWGHIWKLHTPLRVKMFMW 576
             +W LS++ V      + S  +  W  +WK     ++K+F W
Sbjct: 162 MLAWNLSKNAVEASSSTATSGERKLWLALWKTKVQAKIKIFAW 204


>gb|EEE65520.1| hypothetical protein OsJ_20966 [Oryza sativa Japonica Group]
          Length = 393

 Score = 61.6 bits (148), Expect = 9e-08
 Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
 Frame = +1

Query: 277 YVSDLIDNITHAWNINLLNEMFTTDVRAEILQTRIFPQDLDQKIIWTLEKNGIFTIKSTY 456
           YV DL+D  + +WN NL+  +   +   E+L+ R+  Q  +    W LEK G+F +KS Y
Sbjct: 46  YVKDLMDAGSRSWNENLIRHVMHKEDADEVLKIRLSNQQPEDFPAWHLEKTGLFIVKSAY 105

Query: 457 --SWFLSQSKV-GRPLRSLSIAKTTWGHIWKLHTPLRVKMFMW 576
             +W LS++ V      + S  +  W  +WK     ++K+F W
Sbjct: 106 RLAWNLSKNVVEASSSTATSGERKLWLALWKTRVQAKIKIFAW 148


>gb|EEC80394.1| hypothetical protein OsI_22529 [Oryza sativa Indica Group]
          Length = 349

 Score = 61.6 bits (148), Expect = 9e-08
 Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
 Frame = +1

Query: 277 YVSDLIDNITHAWNINLLNEMFTTDVRAEILQTRIFPQDLDQKIIWTLEKNGIFTIKSTY 456
           YV DL+D  + +WN NL+  +   +   E+L+ R+  Q  +    W LEK G+F +KS Y
Sbjct: 2   YVKDLMDAGSRSWNENLIRHVMHKEDADEVLKIRLSNQQPEDFPAWHLEKTGLFIVKSAY 61

Query: 457 --SWFLSQSKV-GRPLRSLSIAKTTWGHIWKLHTPLRVKMFMW 576
             +W LS++ V      + S  +  W  +WK     ++K+F W
Sbjct: 62  RLAWNLSKNVVEASSSTATSGERKLWLALWKTRVQAKIKIFAW 104


>gb|EEE59920.1| hypothetical protein OsJ_12548 [Oryza sativa Japonica Group]
          Length = 1076

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
 Frame = +1

Query: 277 YVSDLIDNITHAWNINLLNEMFTTDVRAEILQTRIFPQDLDQKIIWTLEKNGIFTIKSTY 456
           YV++LI+     WN  L+  +   +   E+L+ R+    +D    W  EK+G+FT+KS Y
Sbjct: 652 YVNELINEENRCWNETLVRHVLKEEDANEVLKIRLPNHQMDDFPAWHHEKSGLFTVKSAY 711

Query: 457 --SWFLSQSKVGRPLRSLSIA--KTTWGHIWKLHTPLRVKMFMW 576
             +W LS   V +   S + +  +  W  +W      +VK+F+W
Sbjct: 712 KLAWNLSGKGVVQSSSSTATSGERKIWSRVWNAKVQAKVKIFIW 755


>gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
          Length = 1874

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
 Frame = +1

Query: 277  YVSDLIDNITHAWNINLLNEMFTTDVRAEILQTRIFPQDLDQKIIWTLEKNGIFTIKSTY 456
            YV++LI+     WN  L+  +   +   E+L+ R+    +D    W  EK+G+FT+KS Y
Sbjct: 846  YVNELINEENRCWNETLVRHVLKEEDANEVLKIRLPNHQMDDFPAWHHEKSGLFTVKSAY 905

Query: 457  --SWFLSQSKVGRPLRSLSIA--KTTWGHIWKLHTPLRVKMFMW 576
              +W LS   V +   S + +  +  W  +W      +VK+F+W
Sbjct: 906  KLAWNLSGKGVVQSSSSTATSGERKIWSRVWNAKVQAKVKIFIW 949


Top